Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02891 ATGTTCTCTTTTCTTCTTTTGCTTTCTGCAATGGAAGACGAGCCTTTTCTCACAACAACGACAATCACTTCCCAACGCGCCGATTTCCTCTTGCAATCTTCCAAGTCCTTCGACGACGTCACAGCCCCACGCGCCGCCCGTAACGCCGAGATTCAGGAGCACCTCTCCCAACCCTCTCCCTTTCACTCCAAGAAGAAAAAGCTCAGCCGTTGCAAGACAGCACCCGCCTTGGTTAGCATGCGGGACCTCAAACCTAAGACGCCCGAAGTCCCCAAGCCTCAGTCCAGTTCCATAATCCGACAGGGCATGTGCTTACTCGCCATGTACCTCTGCGTGGGAGTCGCCATTTACTCTTTCAACAGGGACAATTTCTCCGGCATCGAGACCCACCCCGTGGTCGATGCCCTTTACTTTTGTATAGTTACCATGTGTACCATAGGTTACGGAGACATCGCTCCCTTGACCCCGTTTACAAAGGTCTTCGCTTGCGTCTTTGTGCTGGTGGGGTTCGGCTTTATCGACATACTCCTCAGTGGCCTTGTCAACTTCGTTTTGGATGTGCAAGAGAACATGATCCTCACGGGGCTCCAAATGGGTGCAACTGGGAGGAAGGGTTTTTCTGCCCGGAACTACATCGTTGATGTGGTGAAGGGGAGGATGAGGATCAGGTTGAAGGTTGGTTTGGCGCTTGGGGTTGTTGTTCTGTGTATTGGGATTGGGTGTTTGGTGTTGTACTTTGTGGAGGGCTTGGATTTGGTTGATTCTATCTACTTGTCAGTTATGTCTGTCACAACGGTTGGGTATGGAGACAGGGCGTTTAAGACACTTCCCGGTCGGTTATTTGCTGCTATTTGGTTGCTCTTTTCTACTCTCATGGTGGCACGCGCTTTCCTCTATTTGGCAGAGGCCAGAATCAATAGAAGGCATCGCAGAATGGCCAACAAGGTGTTGCAGAGAGAAATTACTGTTGAGGATTTGCTTGCTGCTGATATCAACCACACTGGTTTCATCAGCAAGTCTGAGTATGTAATCTTCAAGCTGAAAGAGATGGGTAAAATACAGGAAAAAGATGTGTTGCAAATTTGTGACCAATTCAGTAAGCTTGATCCCTCTGACTGTGGGAAGATAACACTACCTCATCTCTTAGGGGGCACTTTATGA 1161 0.491 MFSFLLLLSAMEDEPFLTTTTITSQRADFLLQSSKSFDDVTAPRAARNAEIQEHLSQPSPFHSKKKKLSRCKTAPALVSMRDLKPKTPEVPKPQSSSIIRQGMCLLAMYLCVGVAIYSFNRDNFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPFTKVFACVFVLVGFGFIDILLSGLVNFVLDVQENMILTGLQMGATGRKGFSARNYIVDVVKGRMRIRLKVGLALGVVVLCIGIGCLVLYFVEGLDLVDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARINRRHRRMANKVLQREITVEDLLAADINHTGFISKSEYVIFKLKEMGKIQEKDVLQICDQFSKLDPSDCGKITLPHLLGGTL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02891 386 Gene3D - 208 329 - -
Viun1g02891 386 Gene3D - 82 194 - -
Viun1g02891 386 FunFam Two-pore potassium channel 3 209 323 - -
Viun1g02891 386 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 133 359 IPR003280 GO:0005267|GO:0016020|GO:0071805
Viun1g02891 386 ProSitePatterns EF-hand calcium-binding domain. 330 342 IPR018247 -
Viun1g02891 386 PRINTS Two pore domain K+ channel signature 141 169 IPR003280 GO:0005267|GO:0016020|GO:0071805
Viun1g02891 386 PRINTS Two pore domain K+ channel signature 264 273 IPR003280 GO:0005267|GO:0016020|GO:0071805
Viun1g02891 386 SUPERFAMILY Voltage-gated potassium channels 95 184 - -
Viun1g02891 386 SUPERFAMILY Voltage-gated potassium channels 215 324 - -
Viun1g02891 386 Pfam Ion channel 234 302 IPR013099 -
Viun1g02891 386 Pfam Ion channel 106 184 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02891 Viun-Chr1 37824146 37826725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02891 34 386 Ion Channels AT4G01840 65.181 2.62e-162 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02891 K05389 - gmx:100780438 616.305