Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02841 ATGGATAATAATACGGTGATGATGACGATGGGTGTGAAGAAGAAGGAGGATTATGCCATAGGGTCATCGTCCTTCCACTTTAATTATCCATTGCTTGATTTCTCTGATGACAAGAGCTCTTTAGGGTTTATGGAGTTGTTGGGTGTGCAAGAATACAGTCCTCTGCTTGATTTGCCTTTAGGGTCCAACGTGGAACTGCTTCCAACCTCTGATGTTAAGGAACTACCTCAGACTAAGAAAGATTGGTCCGAGGTAACCAACCAGCAACCTGCGACTCCGAACTCTTCATCCATTTCCTCCGCGTCCAGTGAGGCTCTCAACGATGAACAAAAGAATAGAACTGTAGACCAAACACATGATGAGCACAAAAAGACAAAGGAACAGTTGAAGGCTAAGAAGACAAATCAGAAGAGACAGAGAGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCTTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCGTGTAATGTGAAGAAACGCGTGGAGCGATCTTTCAGCGACCCAAGCATTGTGGTGACAACCTACGAAGGCCAACACACTCATCCAAGCCCGGTTATGGGTCGCTCCAATAATTTTTGTTCGCTAATGTCTGGATCTGAGAACTACATGTCCCAATATTATCAGCAGCAGCACCAACAACCACTCCATGTCGATGCATTGTCTTCTCTGGGTTTCCTCTCTCCAAAGAATGTCACTTTTCCTCAAGAGACAGCGTTGTTGAGTGACTATGGGCGTCTTCAAGATGTTGTTCCTTCACTTATGTTCAAACAAGACTAG 870 0.4517 MDNNTVMMTMGVKKKEDYAIGSSSFHFNYPLLDFSDDKSSLGFMELLGVQEYSPLLDLPLGSNVELLPTSDVKELPQTKKDWSEVTNQQPATPNSSSISSASSEALNDEQKNRTVDQTHDEHKKTKEQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFSDPSIVVTTYEGQHTHPSPVMGRSNNFCSLMSGSENYMSQYYQQQHQQPLHVDALSSLGFLSPKNVTFPQETALLSDYGRLQDVVPSLMFKQD 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02841 289 MobiDBLite consensus disorder prediction 109 141 - -
Viun1g02841 289 MobiDBLite consensus disorder prediction 77 141 - -
Viun1g02841 289 Pfam WRKY DNA -binding domain 156 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02841 289 Coils Coil 119 139 - -
Viun1g02841 289 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 239 IPR044810 GO:0003700
Viun1g02841 289 SMART WRKY_cls 155 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02841 289 PIRSF WRKY_txn_fact_IIc 1 289 IPR017396 GO:0003700
Viun1g02841 289 ProSiteProfiles WRKY domain profile. 150 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02841 289 SUPERFAMILY WRKY DNA-binding domain 147 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02841 289 Gene3D WRKY domain 140 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02841 289 FunFam WRKY transcription factor 57 141 215 - -
Viun1g02841 289 MobiDBLite consensus disorder prediction 81 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02841 Viun-Chr1 37532523 37534338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02841 27 219 WRKY Transcription Factor Family AT2G47260 54.310 1.87e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun1g02841 WRKY 1.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02841 - - vra:106757666 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02841 1 37532523 37534338 Viun1g02841 1 37532523 37534338 ECH
Viun1g02841 1 37532523 37534338 Viun7g01827 7 23430167 23432291 PCT