Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02835 ATGTCAATCGGTATGTTAAAAAGGTTTCAAGGCTTGCTGCTGAAATGGATGCTTATATTGTCTTGCCTGGCATTTATGATTGTGGCTGGTGAAAATGATAAAACAATGGTGCCCCCTTCTTTATATGATTCTAGATCACCTTTGGCCTTTACTGTTGTTCACGATCTACCTCTACCAGCAAGTCTCCATTTGTCAAAGCATGTGCTTTCTCAAGGTGCGCCACTTGAAGCACCGTCACCAGTCAATCCTCCTTCATACGGTCCTTTCTCAACTGCAGGCCCTTCTGCTTCAACTCAGCCACCATTGTCTCCTTATGCTTCCAATTGTTGTAAACAAGACATGGTGCTGAAAAGAGCCACTCCTACGTTAGCTGCATCACCTGTGAAAACACCTTCGTATCATTCACCTACCGCTATGTCATCATCTGGTTCTTCAGGAAGGCGTTCAAATCTGTTTATTATTCTTGGAATTGTTATTGGCATAATCTTTATTGGTATCATATCTGTACTTATATTCTGTTTATGTACATTCCTGCCCAAAGCAAACGCTCCTCCTGGGGAAACTGAAAAGCCAAGGATAGAGAGTACAATTTCAACTGTGGGTTCTCTTCCTCACCCAAGTAGTACACGATTTATTGCTTATGAAGAGCTTAAAGAAGCAACAAACAACTTTGAAACAGCGAGTGTACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGTGTCTTGAACGATGGTACTCCTGTTGCAATTAAGAGGCTTACAAGTGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTGGAAGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTTCAGTAATCGTGACTCGTCACAAAATCTACTTTGCTATGAGCTTGTTCCCAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATTAATTGTCCTTTGGATTGGGACACCAGAATGAAAATTGCGCTTGATGCTGCAAGGGGACTTTCATACCTGCACGAAGACTCACAGCCCTGTGTAATACACAGAGACTTCAAGGCATCCAACATATTACTGGAGAACAACTTTCATGCTAAGGTTGCAGATTTTGGTCTCGCTAAGCAAGCACCTGAAGGCAGATCAAATTATTTGTCTACTCGTGTCATGGGGACATTTGGGTACGTAGCTCCTGAGTATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTCTATAGCTATGGCGTTGTCTTACTGGAACTGCTTACTGGTAGGAAGCCTGTGGATATGTCACAACCAACTGGGCAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTCGAGATAAGGATAGGTTGGAAGAGATTGTTGATCCAAGCCTCGGGGGAAAGTATCCTAAAGAAGATTTTGTACGTGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCCGAAGCAAACCAGCGACCCACAATGGGTGAAGTGGTGCAGTCACTTAAAATGGTGCAACGCGTCACAGAATACCATGATTCTCTGTTGGCCTCATCCAATACTCGAGCCAACCTTAGACAGTCCTCTAGCACTTTTGAATTTGATGGAACATCTTCTGTATTCTCTTCGGGTCCTTACTCTGGTATAAGTGCCTTTGAAAATGACAACATTTCAAGGACTGTGGTTTTCTCTGAAGATCTTTGTGAAGGACGATAA 1707 0.4353 MSIGMLKRFQGLLLKWMLILSCLAFMIVAGENDKTMVPPSLYDSRSPLAFTVVHDLPLPASLHLSKHVLSQGAPLEAPSPVNPPSYGPFSTAGPSASTQPPLSPYASNCCKQDMVLKRATPTLAASPVKTPSYHSPTAMSSSGSSGRRSNLFIILGIVIGIIFIGIISVLIFCLCTFLPKANAPPGETEKPRIESTISTVGSLPHPSSTRFIAYEELKEATNNFETASVLGEGGFGRVFKGVLNDGTPVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEEIVDPSLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVTEYHDSLLASSNTRANLRQSSSTFEFDGTSSVFSSGPYSGISAFENDNISRTVVFSEDLCEGR 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02835 568 Gene3D Transferase(Phosphotransferase) domain 1 302 521 - -
Viun1g02835 568 FunFam Receptor-like serine/threonine-protein kinase ALE2 302 519 - -
Viun1g02835 568 FunFam Receptor-like serine/threonine-protein kinase ALE2 204 301 - -
Viun1g02835 568 CDD STKc_IRAK 230 500 - -
Viun1g02835 568 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Viun1g02835 568 MobiDBLite consensus disorder prediction 126 146 - -
Viun1g02835 568 Pfam Protein kinase domain 225 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02835 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 348 360 IPR008271 GO:0004672|GO:0006468
Viun1g02835 568 Gene3D Phosphorylase Kinase; domain 1 205 301 - -
Viun1g02835 568 PANTHER OS01G0750732 PROTEIN 112 515 - -
Viun1g02835 568 SUPERFAMILY Protein kinase-like (PK-like) 197 501 IPR011009 -
Viun1g02835 568 ProSiteProfiles Protein kinase domain profile. 224 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02835 Viun-Chr1 37458547 37464493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02835 121 568 Receptor kinase-like Gene Family AT4G02010 75.885 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Viun1g02835 Pkinase 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02835 - - gmx:100775615 816.609