Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02825 ATGGACACTGATGCTAATGCCTCTTCCCAACCCGACTCAGAAGCATCTTCAGAGCTCAAATCATCAGAGACTCAAACATCAAAGAAAAGGAAACTGGTTGAGAAAAGAGTTGTGGCAGTGAGGATAGGAGAGAATGTTGGGAAGGTGAAGAATGAAGGGCTACCTTCGGATTTTTGGTCTTGGAGAAAATATGGACAAAAACCTATCAAAGGGTCTCCATATCCAAGGGGCTATTACAAGTGCAGCACATCCAAAGGTTGTTCAGCCAAAAAACAGGTAGAGAGATGCAGAACAGATGCTTCAATGCTCATCGTCACATATACCTCTACACATAACCATCCATGCCCCACCACCACCACCGCCACCTCCACCACCACAAATTCACCCCAACAACCAAAAGAATCTGAATCCGAAACCACCCAAGACCTCTCAGGTATCTCAAAGGAGGAAGATCAAGAACATATAGAAGAAGAACAAAGGGATGATGATAAGCCCAGAGATGAAGGTAGAAATGAAGAAAAGTTTCTTTACCTGCAATCTTCCCAAGACATAATAATAGAACAAGAAGACCCTTTCAAGCTAAACACGGAGAAAAGCCATGAGAGAATAGATCTTCTCTTGGAGGAGGAAGAACCCCTTTGTTACGCACAAGTCAAGAACTTGTCGGCTTCCGAAAGCGAAGAACTTGATTTTTTCGATGAGCTTGAGGAGTTGCCCATGTCTTCATCTTTCTTTAACTTCACGAGGAGCATTTTTTCCGATGAAAGGATTCCCGTTGCCCCTTCTTGA 789 0.436 MDTDANASSQPDSEASSELKSSETQTSKKRKLVEKRVVAVRIGENVGKVKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIVTYTSTHNHPCPTTTTATSTTTNSPQQPKESESETTQDLSGISKEEDQEHIEEEQRDDDKPRDEGRNEEKFLYLQSSQDIIIEQEDPFKLNTEKSHERIDLLLEEEEPLCYAQVKNLSASESEELDFFDELEELPMSSSFFNFTRSIFSDERIPVAPS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02825 262 SMART WRKY_cls 55 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02825 262 FunFam WRKY transcription factor 65 39 116 - -
Viun1g02825 262 Pfam WRKY DNA -binding domain 57 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02825 262 MobiDBLite consensus disorder prediction 1 33 - -
Viun1g02825 262 MobiDBLite consensus disorder prediction 1 22 - -
Viun1g02825 262 MobiDBLite consensus disorder prediction 109 176 - -
Viun1g02825 262 ProSiteProfiles WRKY domain profile. 50 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02825 262 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 245 IPR044810 GO:0003700
Viun1g02825 262 Gene3D WRKY domain 43 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02825 262 MobiDBLite consensus disorder prediction 109 142 - -
Viun1g02825 262 MobiDBLite consensus disorder prediction 143 174 - -
Viun1g02825 262 SUPERFAMILY WRKY DNA-binding domain 52 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02825 Viun-Chr1 37439500 37441017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02825 11 128 WRKY Transcription Factor Family AT3G58710 55.833 2.42e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun1g02825 WRKY 3.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02825 - - gmx:100127368 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02825 1 37439500 37441017 Viun1g02825 1 37439500 37441017 ECH