Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02822 ATGGAACTTGACCAATTTTCATCCACAGCTTTAAATTTAAGAGAAATCCTAGTGGGTTATGGCTCTACTCAAGAAGATGTGTTCCAAGGGAAAGAGGGTTTCTCTGGAATGGAATTGCTGGGATCTGTTGAGGATGAAAAAGGAACCAAACTGTTCGAGGATGAAGATCACAAACAGCTTCAAGAACCCCAAGTTGATAAGTTGTTAGAAGAGTTTAACTATGACCATGATATGCAACTGAAACCAACACCACAGTTCGATGAAACTACATGGCCAGGGAAACATGACTTAGAATCAGCTGAATACAATAATCATGTGCCACCATCATTATCATCCTTAGAGCTGCTGAGAAACTACAGAAGCCGATTTAAGAGGATAAGCGAGCAAAATATAACAAAACCTTCTTTGGATCACCACCAGATATCAACTGAAGAAATTATGAGAGTAGCTGGAGCAAGGTATGTTCAATATTCTGCACATTGGAATGATAGTTTTTGCATCCCTATGCACCCATATGGATTGGATTTTGGTGGTTTGTCTGAGGAAGAAAATAGAGACGTAGAACTTGTTCAATTTCTCCTTGCTGCAGCTGAGAGGGTAGGTTGCTACCAATTTGAACGTGCAAGTAGGTTACTTCTCCACTGCCAACGAAATTCATCACCCAATAATGCAAGTCCTGTTCAAAGAGTTATCTTTCACTTTGCTGAAGCACTTCGAGAGAGAATTGATAAAGGACTAGGAAGAACGACAACGAAGGGATCAGACAAAAATGAAGAAAGGGGGTTGATTCAAAAGATTGACACCAACGTTGCCCTAACATGCCATCAAAATATTCCTTTCAATCAAGTCATGCAATTCACCGGAATACAAACTATAGTGGAACATGTTGCATCCGAGACAAAAATCCATGTTATTGATCTTGAAACAATAAGTGGGGTGCACAATACAGTTTTGATGCAAGCACTGACAGAACGGCAGGATTGCAAAGTGCAACTTTTGAAGATAACTGCACTTGCACTTGATTCATGCAGAAGCATGATAGAAGAGACTGGAAAAAGACTTTGCAGAGATAAGAGAAGACGATTTTGA 1089 0.3985 MELDQFSSTALNLREILVGYGSTQEDVFQGKEGFSGMELLGSVEDEKGTKLFEDEDHKQLQEPQVDKLLEEFNYDHDMQLKPTPQFDETTWPGKHDLESAEYNNHVPPSLSSLELLRNYRSRFKRISEQNITKPSLDHHQISTEEIMRVAGARYVQYSAHWNDSFCIPMHPYGLDFGGLSEEENRDVELVQFLLAAAERVGCYQFERASRLLLHCQRNSSPNNASPVQRVIFHFAEALRERIDKGLGRTTTKGSDKNEERGLIQKIDTNVALTCHQNIPFNQVMQFTGIQTIVEHVASETKIHVIDLETISGVHNTVLMQALTERQDCKVQLLKITALALDSCRSMIEETGKRLCRDKRRRF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02822 362 ProSiteProfiles GRAS family profile. 180 362 IPR005202 -
Viun1g02822 362 Pfam GRAS domain family 189 355 IPR005202 -
Viun1g02822 362 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 130 356 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02822 Viun-Chr1 37432803 37434256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02822 187 355 GRAS Transcription Factor Family AT5G41920 30.409 1.27e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun1g02822 GRAS 2.6e-24 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02822 - - vum:124820400 615.15