Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02821 ATGGAACTTGACCAATTTTCATCCACAGCTTTAAATTTAAGAGAAATCCTAGTGGGTTATGGCTCTACTCAAGAAGATGTGTTCCAAGGGAAAGAGGGTTTCTCTGGAATGGAATTGCTGGGATCTGTTGAGGATGAAAAAGGAACCAAACTGTTCGAGGATGAAGATCACAAACAGCTTCAAGAACCCCAAGTTGATAAGTTGTTAGAAGAGTTTAACTATGACCATGATATGCAACTGAAACCAACACCACAGTTCGATGAAACTACATGGCCAGGGAAACATGACTTAGAATCAGCTGAATACAATAATCATGTGCCACCATCATTATCATCCTTAGAGCTGCTGAGAAACTACAGAAGCCGATTTAAGAGGATAAGCGAGCAAAATATAACAAAACCTTCTTTGGATCACCACCAGATATCAACTGAAGAAATTATGAGAGTAGCTGGAGCAAGGTATGTTCAATATTCTGCACATTGGAATGATAGTTTTTGCATCCCTATGCACCCATATGGATTGGATTTTGGTGGTTTGTCTGAGGAAGAAAATAGAGACGTAGAACTTGTTCAATTTCTCCTTGCTGCAGCTGAGAGGGTAGGTTGCTACCAATTTGAACGTGCAAGTAGGTTACTTCTCCACTGCCAACGAAATTCATCACCCAATAATGCAAGTCCTGTTCAAAGAGTTATCTTTCACTTTGCTGAAGCACTTCGAGAGAGAATTGATAAAGGACTAGGAAGAACGACAACGAAGGGATCAGACAAAAATGAAGAAAGGGGGTTGATTCAAAAGATTGACACCAACGTTGCCCTAACATGCCATCAAAATATTCCTTTCAATCAAGTCATGCAATTCACCGGAATACAAACTATAGTGGAACATGTTGCATCCGAGACAAAAATCCATGTTATTGATCTTGAAACAATAAGTGGGGTGCACAATACAGTTTTGATGCAAGCACTGACAGAACGGCAGGATTGCAAAGTGCAACTTTTGAAGATAACTGCACTTGCACTTGATTCATGCAGAAGCATGATAGAAGAGACTGGAAAAAGTTTTTGTGACAGACTTTGCAGAGATAAGAGAAGACGATTTTGA 1101 0.3978 MELDQFSSTALNLREILVGYGSTQEDVFQGKEGFSGMELLGSVEDEKGTKLFEDEDHKQLQEPQVDKLLEEFNYDHDMQLKPTPQFDETTWPGKHDLESAEYNNHVPPSLSSLELLRNYRSRFKRISEQNITKPSLDHHQISTEEIMRVAGARYVQYSAHWNDSFCIPMHPYGLDFGGLSEEENRDVELVQFLLAAAERVGCYQFERASRLLLHCQRNSSPNNASPVQRVIFHFAEALRERIDKGLGRTTTKGSDKNEERGLIQKIDTNVALTCHQNIPFNQVMQFTGIQTIVEHVASETKIHVIDLETISGVHNTVLMQALTERQDCKVQLLKITALALDSCRSMIEETGKSFCDRLCRDKRRRF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02821 366 ProSiteProfiles GRAS family profile. 180 366 IPR005202 -
Viun1g02821 366 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 130 352 IPR005202 -
Viun1g02821 366 Pfam GRAS domain family 189 352 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02821 Viun-Chr1 37432684 37434256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02821 181 358 GRAS Transcription Factor Family AT3G46600 28.649 2.41e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun1g02821 GRAS 5.4e-23 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02821 - - vum:124820400 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02821 1 37432684 37434256 Viun1g02821 1 37432684 37434256 ECH