Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun1g02807 | ATGGCAGAGGTTGTTTTGTTAGTCGATGATTTGAAGCTGCTTTCTGGGGTTCCTCGCTGTAGAATTTGTCACGAAGAAGAGTTTGAAAGCATAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGTTTGCTCATAGAGATTGCATACAAAGATGGTGTAACGAGAAAGGAAATACAACCTGTGAAATATGTCTCCAGCAATATGAACCCGGATATTCAGCTCCACCCAAGAAGTCTAAGATAAATGATGAAGCAATGTCCATTAGGGAGGAAGAAGAAGAGTCAAACGAAAGAACAGAGATAACGGTTGAAGGAGTTGCAGTGGAAAGCGATTACTCGGAATGCAGTTCAGGCGGGGACAGAAACGCGTCTTGCTGTCGATCACTTGCAATAGCTTTTACGATTGTCTTGCTAGTAAGACATTTTTTCGCAGTGCTTTCAAACGGAACGCAAGATTACCCATTTACACTATTTACTGTAATTATATTAAAGGCTAGCGGAATTATTATACCTATGTACATAGTTATTAAGATTATTGGAGCCATTCAGAACAGTAGTAAGCAGTATCAAGATTCTGATGATGAAGATGAGATACAGCATAATGTAAATTTAAGACATTCATAG | 633 | 0.3934 | MAEVVLLVDDLKLLSGVPRCRICHEEEFESIETLEAPCACSGTVKFAHRDCIQRWCNEKGNTTCEICLQQYEPGYSAPPKKSKINDEAMSIREEEEESNERTEITVEGVAVESDYSECSSGGDRNASCCRSLAIAFTIVLLVRHFFAVLSNGTQDYPFTLFTVIILKASGIIIPMYIVIKIIGAIQNSSKQYQDSDDEDEIQHNVNLRHS | 210 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun1g02807 | 210 | Pfam | RING-variant domain | 20 | 67 | IPR011016 | GO:0008270 | |
Viun1g02807 | 210 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 19 | 191 | IPR033275 | - | |
Viun1g02807 | 210 | CDD | RING_CH-C4HC3_MARCH | 20 | 67 | - | - | |
Viun1g02807 | 210 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 14 | 77 | IPR013083 | - | |
Viun1g02807 | 210 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 12 | 74 | IPR011016 | GO:0008270 | |
Viun1g02807 | 210 | SMART | ringv_2 | 19 | 68 | IPR011016 | GO:0008270 | |
Viun1g02807 | 210 | FunFam | E3 ubiquitin-protein ligase MARCH4 | 9 | 77 | - | - | |
Viun1g02807 | 210 | SUPERFAMILY | RING/U-box | 18 | 72 | - | - | |
Viun1g02807 | 210 | ProSiteProfiles | Zinc finger RING-type profile. | 20 | 67 | IPR001841 | - | |
Viun1g02807 | 210 | Pfam | Protein of unknown function (DUF3675) | 73 | 182 | IPR022143 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun1g02807 | Viun-Chr1 | 37345570 | 37349174 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun1g02807 | 20 | 108 | C3H Transcription Factor Family | AT2G37950 | 33.333 | 3.63e-06 | 44.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun1g02807 | - | - | vum:124822982 | 345.51 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun1g02807 | 1 | 37345570 | 37349174 | Viun1g02807 | 1 | 37345570 | 37349174 | ECH | |
Viun1g02807 | 1 | 37345570 | 37349174 | Viun7g01798 | 7 | 23107061 | 23109512 | PCT |