Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02785 ATGTCAAACGACGCCGTTTGCTTCTATTCGGTGCTTGGGATTGGCAAACATTCGAGCGATGGTGAAATTCGATGCGCTTATCGGAAGATGGCTCTGAAGTGGCATCCTGATAGATGGAGCAAGGACCCAAAGTTTGCACCGGAGGCAAAAAAACGGTTTCAGCACGTTCAAGAGGCTTATTCAGTTTTGTCCAACACAGGGAAGAGAAGGATATATGATGCTGGTTTGTTTGGTCTAATTGGAGAGGATGATGATGAGGGATTTGTTGATTTCATGCAAGAAATGATCTTGATGATGCAGAATGAAAGACCCAAGGATGAGAAAGGAACAACGGAGGATCTACAAGGACTGTTAAGGGATATGATGATGAAAGAAAATGAAGGGATAGGGGAGTCTGGGTTTAGCTGTAATTCATCTCCATGTCCTACAAAGAGGACGCGTATTTCATGA 450 0.4378 MSNDAVCFYSVLGIGKHSSDGEIRCAYRKMALKWHPDRWSKDPKFAPEAKKRFQHVQEAYSVLSNTGKRRIYDAGLFGLIGEDDDEGFVDFMQEMILMMQNERPKDEKGTTEDLQGLLRDMMMKENEGIGESGFSCNSSPCPTKRTRIS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02785 149 Pfam DnaJ domain 8 73 IPR001623 -
Viun1g02785 149 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Viun1g02785 149 MobiDBLite consensus disorder prediction 131 149 - -
Viun1g02785 149 MobiDBLite consensus disorder prediction 128 149 - -
Viun1g02785 149 CDD DnaJ 7 65 IPR001623 -
Viun1g02785 149 ProSiteProfiles dnaJ domain profile. 7 76 IPR001623 -
Viun1g02785 149 SUPERFAMILY Chaperone J-domain 4 77 IPR036869 -
Viun1g02785 149 PANTHER PUTATIVE, EXPRESSED-RELATED 4 130 - -
Viun1g02785 149 PRINTS DnaJ domain signature 27 42 IPR001623 -
Viun1g02785 149 PRINTS DnaJ domain signature 48 68 IPR001623 -
Viun1g02785 149 PRINTS DnaJ domain signature 9 27 IPR001623 -
Viun1g02785 149 Gene3D DnaJ domain 1 86 IPR036869 -
Viun1g02785 149 SMART dnaj_3 6 68 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02785 Viun-Chr1 37190382 37191798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02785 7 74 C2H2 Transcription Factor Family AT1G74250 46.377 1.30e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02785 - - pvu:PHAVU_001G210400g 275.018