Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02772 ATGGCTTCCAAGCTTTCTTATTCTCTCTCAATCTTTCTCTTTCTCTTACCTTTCTTTCACTCTGTAATAGTTTCCGCAGACACCGTTTCAAATCCTTCAACTCCTGTCTCCCCTGGAACCGCATGCCAATCCACCCCCGACCCATCTTACTGTAAATCCGTTCTCCCTCCCCAAAACGGCAACGTTTACGACTATGGCCGATTCTCCGTCAAAAAGTCACTATCGCAGGCTCGAAAGTTCTTGAGCCTCGTCGACAAATACCTCCAGCGTCGTTCTTCTCTTTCCGCCACCGCAATCCGTGCGCTGCAAGATTGCCGTACTCTCGGGGAACTCAACTTCGATTTCCTTTCGAGTTCCTTCCAAACCGTGAACAAGACAACGAGGTTTCTCCCCAGTTTTCAAGCCGACGACATCCAAACCTTACTCAGCGCCATTCTGACCAACCAGCAAACATGCCTGGACGGTCTCAAAGACACTGCATCCGCTTGGAGCGTCAGAAACGGTCTCACACTCCCTCTCTCCAACGACACCAAACTCTACAGTGTCTCGCTCGCTCTCTTCACCAAGGGTTGGGTTCCCAGATCCAAACTCAACACAATGCACCCTACCAAGAAACAACAAGGGTTCCGAAACGGGCGTTTGCCGCTTAAGATGTCCAGCACAACCCGTGCGATCTACGAGTCCGTGAGTAGGAGGAAGCTCCTTCAGGTCTCGGTGAGTCAGGGTGTTGTGGTGAGAGATATTGTGACGGTGAGCCAAGATGGAAGCGGGAACTTCACCACCATCAGTGATGCCATTGCTGCAGCTCCCAACAAATCTGTCTCCACCGATGGATACTTCCTTATCTACGTCACTGCTGGTGTGTATGACGAAATTGTGACCATCGATAAGAAGAAGACCTACTTGATGATGGTCGGCGATGGTATCAACAAGACAATTATCACCGGCAATCGTAGCGTCGTTGATGGCTGGACAACCTTCAGCTCCGCAACATTAGCTGTGGTAGGGCAAGGATTCGTGGGTGTGAATATGACCATCCGCAACACCGCCGGAGCCGTGAAGCACCAAGCTGTGGCCGTTCGAAACGGAGCAGATTTGTCCACGTTTTACAGCTGCAGCTTCGAGGGGTATCAAGACACACTATACGTCCATTCACTGAGACAATTCTACAGCGAATGCGACATCTACGGCACCGTAGATTTCATATTCGGAAACGCTAAGGTTGTGTTCCAGAGTTGCAACATGTATCCTCGTCTCCCCATGCAGGGTCAATTCAACGCCATCACCGCACAAGGAAGAACAGATCCAAACCAAGACACTGGAATTTCTATCCACAACTGTAGCATTAGAGCAGCTGACGATTTGGCTTCTAGCAGCGGTGTTTCAACATATTTGGGAAGGCCGTGGAAGGAATATTCTAGAACTGTTTATATGCAAACTTTTATGGATGATTTGATCAACGGTGCAGGGTGGCGTGCATGGGACGGTGATTTTGCATTAAGCACTTTGTATTACGCAGAGTACAGCAACACTGGGCCAGGGTCTAATACCAGCAATAGAGTGACGTGGTCTGGTTATCACGTGATTAATGCCACTGATGCAGCTAATTTTACAGTGTCGAATTTTTTGCTTGGTGATGATTGGTTACCCCAGACAGGAGTGTCTTACACCGATAACCTCATATAG 1686 0.4905 MASKLSYSLSIFLFLLPFFHSVIVSADTVSNPSTPVSPGTACQSTPDPSYCKSVLPPQNGNVYDYGRFSVKKSLSQARKFLSLVDKYLQRRSSLSATAIRALQDCRTLGELNFDFLSSSFQTVNKTTRFLPSFQADDIQTLLSAILTNQQTCLDGLKDTASAWSVRNGLTLPLSNDTKLYSVSLALFTKGWVPRSKLNTMHPTKKQQGFRNGRLPLKMSSTTRAIYESVSRRKLLQVSVSQGVVVRDIVTVSQDGSGNFTTISDAIAAAPNKSVSTDGYFLIYVTAGVYDEIVTIDKKKTYLMMVGDGINKTIITGNRSVVDGWTTFSSATLAVVGQGFVGVNMTIRNTAGAVKHQAVAVRNGADLSTFYSCSFEGYQDTLYVHSLRQFYSECDIYGTVDFIFGNAKVVFQSCNMYPRLPMQGQFNAITAQGRTDPNQDTGISIHNCSIRAADDLASSSGVSTYLGRPWKEYSRTVYMQTFMDDLINGAGWRAWDGDFALSTLYYAEYSNTGPGSNTSNRVTWSGYHVINATDAANFTVSNFLLGDDWLPQTGVSYTDNLI 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02772 561 Gene3D - 243 560 IPR012334 -
Viun1g02772 561 NCBIfam pectinesterase inhibitor domain 8 188 IPR006501 GO:0004857
Viun1g02772 561 PANTHER PECTINESTERASE 24 550 - -
Viun1g02772 561 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Viun1g02772 561 CDD PMEI-like_3 40 191 - -
Viun1g02772 561 Pfam Plant invertase/pectin methylesterase inhibitor 40 186 IPR006501 GO:0004857
Viun1g02772 561 SMART PMEI_2 33 186 IPR006501 GO:0004857
Viun1g02772 561 FunFam Pectinesterase 39 189 - -
Viun1g02772 561 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 189 IPR035513 -
Viun1g02772 561 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 189 IPR035513 -
Viun1g02772 561 SUPERFAMILY Pectin lyase-like 244 557 IPR011050 -
Viun1g02772 561 Pfam Pectinesterase 249 546 IPR000070 GO:0030599|GO:0042545
Viun1g02772 561 FunFam Pectinesterase 243 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02772 Viun-Chr1 37097515 37099588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02772 9 561 Carbohydrate Esterase AT4G02330 62.892 0.0 725