Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02751 ATGATTACTTTACCACATCCTATGTTTCTGTTTGTATTGTTTCTTTCACTCCTAAGCCAAATGGTAGCTGCAAAAGGGAAGGACAACGTTACAGAGGCTTGCAGTGTGACAAGGTACCAAAGCCTTTGTGTTCATTCTCTGTCACAATTCTCCAACACTGCAGGAAGAAGCCCTAGCAAGTGGGCACGTGCGGGAGTGTCGGTGTCGATTGGCGAGGTTAAGAATGTTAAAGCGTATCTTGCAGAATTGAAGAAGCATGGACACATGAAGGGAAGAAACAAAATTGCGCTTTCAGATTGTGCTGAATCTTTTTCCTATGCCCTTGACGAGCTTCACAGATCACTGGGTGTGCTTAGGAGGCTGAGCAAAACCACGTTCAGCACCCAAATGGGAGACCTCAACACGTGGATCAGTGCAGCACTCACTGATGAAGAAACTTGCCTCGAAGGGTTTGAAGGAGAAAATGAGAAGCATGTTAAAGTGCTGCAAAACCGTGTTCAGAATGTGTCTTACATCACCAGCAACGCTCTTGCTCTTGTCAATAAACTTGCCACCACAGGTCTGGGAAGCATCAACGATCCATAG 585 0.4581 MITLPHPMFLFVLFLSLLSQMVAAKGKDNVTEACSVTRYQSLCVHSLSQFSNTAGRSPSKWARAGVSVSIGEVKNVKAYLAELKKHGHMKGRNKIALSDCAESFSYALDELHRSLGVLRRLSKTTFSTQMGDLNTWISAALTDEETCLEGFEGENEKHVKVLQNRVQNVSYITSNALALVNKLATTGLGSINDP 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02751 194 NCBIfam pectinesterase inhibitor domain 8 183 IPR006501 GO:0004857
Viun1g02751 194 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 183 IPR035513 -
Viun1g02751 194 CDD PMEI-like_3 33 185 - -
Viun1g02751 194 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 185 IPR035513 -
Viun1g02751 194 SMART PMEI_2 25 179 IPR006501 GO:0004857
Viun1g02751 194 Pfam Plant invertase/pectin methylesterase inhibitor 29 179 IPR006501 GO:0004857
Viun1g02751 194 FunFam Pectinesterase inhibitor 3 25 184 - -
Viun1g02751 194 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02751 Viun-Chr1 36997267 36998198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02751 33 191 Carbohydrate Esterase AT3G14310 32.927 5.05e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02751 - - gmx:100791264 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02751 1 36997267 36998198 Viun1g02751 1 36997267 36998198 ECH