Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02717 ATGGATGCGTGGAACGAAGATTTTGCGGAGCAGGAGATTGGGAGCTCCGCAGAATCGTTCCAAAAGTTTTTGCTTTCGCAGAAAGATCTCTTCCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTTACGCAATGCAAACTCACCGGTGTCAACCCTCTCTCTCAAGAAATGGCAGCTGGTGCTTTGTCAATAAAAATTGGAAAAAGACCTAGGGATTTATTGAATCCAAAGGCTGTAAATTACATGCAATCAATTTTTTCGATTAAAGATTCTATTAGCAAAAAAGAGTTGCGCGAGATCAGTGCTTTATTTGGTGTCACAGCGACACAGGTGCGTGACTTTTTCACTGGGCAGCGGTCAAGAGTGAGGAGACTAGTGCAGCTTTCAAAAGAGAGGGCACTAGGTTCCAATTCTTCTGAAGATCCTCAGGATGATAAAATAATTCCTGATCCTGTGAGACTAATTAATCCAGCTTCCGTAAACTCTACTGTCCCATCCAATGCTGAAGAAGCATCTTGTTCAACACAGGATGCTGCCTTGTCTGACCTAGATGATTCAGATAAACATTTTGTTGATAATATTTTTAGTTTAATGCAACAAGAAGAGACATTTTCCGGGCAAGAGAAATTGATGGAGTGGATATTGACGATACAGAATTTTTCAGTATTGTTGTGGTTTTTGAGCCGAGGGGGTGGAATAACTTTAGCTACTTGGTTGAGTAAGGCAACTGTTGAGGAGCAAACTAGTGTCCTTGTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCATTCCCATGCACATATCAGCTATATTGCAGAGTGTAAATAAACTTCGGTTCTACAGGACATCAGACATATCAAACAGGGCAAGGATTTTGTTATCAAAGTGGAGCAAATTATTAGCGAGGAACCAAGTAATAAAGAAGCCCAATGGTGTTAGGCCTTCTAGTGATGGACATAAAGATTTGATTTCTCAGAGGATTGGTCAATTTGTGGGCTCTGAATCATGGCATTCCAATATTGATGTTCCTGAAGACTTTCTTTCACTTTCAAGCGAATGTCTGGACAACTTCAGGAAAGTGGGATCTCCACAAGCTGCGAAATTGTTGCCTTCTAGCTTCGATGATTCTAATAAAAAGTCCACACTTGGTGTATCTTCATCTCAATCTAGAGAGCGCCGAAAAGTGCAATTGGTGGAACAGCCAGGCCAAAAGTCGGTTAGCAGAAGTTCACAGGTGACAAGAGCAGGGTCTGTAAGTCAAGGTCGGCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTATTTATGCAGAGTAAGTATGGGAAATCCGGTTCAAAAGAAAGTAAAGAAACAAAGATTGATAGTCTGAATAAACAACCTCAGACAATTCCTGCCAGTATTGCAGCTTGCTCTTCTAAAGTTCCTACTCCTCCCAAAATTGATGAAAACAAGAAACCTTTGTTACTTGCCTCTAAAACCAGCAATAGGCTAGAAGCTTATTCAAAACCGAAAATGGATGTGAAGGAACCTCTCTGGGAGAAGTGCATGAGGATTCAGATACCATGGAAAACACCAGCAGAAGTGGAACTTAAAGATAGCTGGAGCGTTGGTGGCGGAGAAAATAGCAAAGAGGTTGATGCTCAGAGAAACAGAGACCGCAGGGAAAAGGAAACTATATATAAAACTATCCAAGAAATCCCACCTAACCCCAAGGAGCCTTGGGACCTTGAAATGGACTATGATGACACTTTGACGTTGGAAATTCCTATTGAACAGTTACCAGATGGTGACGGTGCAGACATAACAGGTTCCCCCAATCAGGTTGCAGCTCATACTGTTGAAGGGGTGGCCTCCACTTCGACAAGTGTGGCTCCTGCTGAGCCTGATTTAGAATTGCTTGCCGTACTGCTGAAAAATCCAGAGTTGGTATTTGCCTTAACTTCAGGACAAGCGGGTAGCATACCGAGTGAAGAAATAGTGAAGCTGCTTGACATGATCAAGAGAGGAGGTGTGAACTTGGGTTTAAGTGAAAATACAAATGGGAGCTATGGCACGACTGTAAAAGCCCAGGAGAAGGTGGAAGTTTCGCTCCCATCTCCAACCCCTTTAAGCGATCCAAGAACGAATGGATGGAGCTCAGAAGCATCAAAAAACCCCTTTTCACGGCGAAGTGTAGCATCCGATAGAATTATCCAGAACCATGCTGCAGTGACAACTACCAACTTACTAACTCAGATTCCCATGACTAGCACTACTACACTAAGGCAACAGCCAGCAGTAGTGGCTTCATCTTCGAGGCATCTCTCAAGCACAACAGTTTCTCCATATTCACTGCATCAGACAACTAATGTTAATCCTGAAAAGCAACAACCACTGGGGCATGTACAAGTATCATCCTCAAATGTAGGTTTAACCATGAAGAAGAACTTAATTACCAATGCACCTTCAGTTAACTATTCTGGCACTCATTCAACTGTAGCAATGCGGGGTAATGGCACCAATTATGTAAAACCCGTACATAGTTTGAGTGTACAACATGAGGGTGTGTCTAATTCCTTCCCACAGTCATCCTTCAAGTTACCCTCACCAACGCCATCAAATTCAGCCTCACAGCTGCAAAGACATCAACAACATGTGGTCCAGGAAGCCCATTACACCGAACCTCCTTATTGTAACCCTAGCCGTTCCTACCCACCACAAACCGAAAAATCAGACCATGGGTCTGAAAGAGTGTGGAGAACTAGGCAAGATGTTGCATTCAGTTCTCAAAGAAATCCTAACAACTATAGTACAATGGTTGGGGGATCCAGGCAATCTGGTTTGTGGGATAGAAATAATCAAGGAGGGGAAGATTTTGAATCATGGAGTCCTGAAAATAGTCCAACTAGAAATCCTAGACATATACCAGGTAGAAACTACCAAGAGTCAAGAGTGAATCATGGAAGAAATCATAGACCTGAATGGTCAAGACAGAGGGGTTCTTCTGAACACTGGGACCCTGGCAGGCAGGAAAATAGAAAGTGGCATGATCAGAGGCGATAA 3066 0.4286 MDAWNEDFAEQEIGSSAESFQKFLLSQKDLFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSIFSIKDSISKKELREISALFGVTATQVRDFFTGQRSRVRRLVQLSKERALGSNSSEDPQDDKIIPDPVRLINPASVNSTVPSNAEEASCSTQDAALSDLDDSDKHFVDNIFSLMQQEETFSGQEKLMEWILTIQNFSVLLWFLSRGGGITLATWLSKATVEEQTSVLVLILKVLCHLPLHKAIPMHISAILQSVNKLRFYRTSDISNRARILLSKWSKLLARNQVIKKPNGVRPSSDGHKDLISQRIGQFVGSESWHSNIDVPEDFLSLSSECLDNFRKVGSPQAAKLLPSSFDDSNKKSTLGVSSSQSRERRKVQLVEQPGQKSVSRSSQVTRAGSVSQGRPMSADDIQKAKMRALFMQSKYGKSGSKESKETKIDSLNKQPQTIPASIAACSSKVPTPPKIDENKKPLLLASKTSNRLEAYSKPKMDVKEPLWEKCMRIQIPWKTPAEVELKDSWSVGGGENSKEVDAQRNRDRREKETIYKTIQEIPPNPKEPWDLEMDYDDTLTLEIPIEQLPDGDGADITGSPNQVAAHTVEGVASTSTSVAPAEPDLELLAVLLKNPELVFALTSGQAGSIPSEEIVKLLDMIKRGGVNLGLSENTNGSYGTTVKAQEKVEVSLPSPTPLSDPRTNGWSSEASKNPFSRRSVASDRIIQNHAAVTTTNLLTQIPMTSTTTLRQQPAVVASSSRHLSSTTVSPYSLHQTTNVNPEKQQPLGHVQVSSSNVGLTMKKNLITNAPSVNYSGTHSTVAMRGNGTNYVKPVHSLSVQHEGVSNSFPQSSFKLPSPTPSNSASQLQRHQQHVVQEAHYTEPPYCNPSRSYPPQTEKSDHGSERVWRTRQDVAFSSQRNPNNYSTMVGGSRQSGLWDRNNQGGEDFESWSPENSPTRNPRHIPGRNYQESRVNHGRNHRPEWSRQRGSSEHWDPGRQENRKWHDQRR 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02717 1021 Gene3D - 66 127 - -
Viun1g02717 1021 MobiDBLite consensus disorder prediction 923 977 - -
Viun1g02717 1021 MobiDBLite consensus disorder prediction 704 727 - -
Viun1g02717 1021 MobiDBLite consensus disorder prediction 374 431 - -
Viun1g02717 1021 SMART HOX_1 68 130 IPR001356 GO:0003677
Viun1g02717 1021 MobiDBLite consensus disorder prediction 405 429 - -
Viun1g02717 1021 MobiDBLite consensus disorder prediction 709 727 - -
Viun1g02717 1021 MobiDBLite consensus disorder prediction 854 1021 - -
Viun1g02717 1021 MobiDBLite consensus disorder prediction 985 1021 - -
Viun1g02717 1021 MobiDBLite consensus disorder prediction 374 396 - -
Viun1g02717 1021 SUPERFAMILY Homeodomain-like 69 131 IPR009057 -
Viun1g02717 1021 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1002 - -
Viun1g02717 1021 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Viun1g02717 1021 MobiDBLite consensus disorder prediction 854 887 - -
Viun1g02717 1021 MobiDBLite consensus disorder prediction 541 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02717 Viun-Chr1 36813013 36821333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02717 464 732 Homeobox Transcription Factor Family AT4G02560 44.689 5.57e-48 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02717 - - gmx:100780237 1639.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02717 1 36813013 36821333 Viun1g02717 1 36813013 36821333 ECH