Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02677 ATGAAGATGAGAGGTTTTCTTGTAGCATGTTTGGCACTGTTCTGTATCCTAGGGGTTTGTGAAGGTGGCGACCTTAGAAAGAAATTCTACAAGCGAACATGTTCTGAGGCCGAGGACATTGTTAGGAGCAAAATCCAGGAACATGTCTCTGCAAGGCCTGAGTTGCCTGCCAAGTTGATCAGAATGCATTTTCATGACTGTTTTGTCAGGGGCTGTGATGGTTCGGTTTTGCTGGACTCCACTGCCAGCAACACAGCAGAGAAAGATTCCATTCCGAACTTATCTCTGTCTGGCTTCGATGTGATCGATGACATAAAAGCAGCATTGGAGGCAAAATGTCCTGGAACTGTATCCTGTGCTGACATACTTGCATTGGCTGCTAGGGATGCTGTTTCTGTCCAATTCAAAAAGCCTATGTGGGAAGTTCTTACCGGAAGACGAGATGGGAAAGTGTCTATTAGTGGTGAAGCCTTGGCCAATCTGCCAGCACCGTTTTTCAACCTCGCCCAACTCAGACAAAGCTTTGAGAGTAAAAAGCTTACCGTGCATGATCTGGTTGTGTTATCAGGAGCACACACAATTGGGGTAGGTCATTGCAACTTATTCAGTAACAGGCTTTTCAACTTCAGCGGAAAGGGTGATCAAGATCCTTCTCTGAATCCTACTTATGCCACTTTTTTGAAGACAAAATGTCAAAGTCTGAGTGACACCACCACTACAGTAGAAATGGATCCTGAGAGTTCAAGCACCTTTGACAATGACTATTATTCTATCCTTATTCAGAACAAGGGTTTATTCCAATCAGATGCTGCCCTTTTAACAGCCAAGGTTTCGAGAAACATTGTGAACGAATTGACGAAACAAGACAAGTTCTTCACAGAGTTTGGACAGTCAATGAAGAGAATGGGAGCCATCGAGGTCCTCACAGGCTCGGATGGAGAAATTAGAACAAAGTGCTCTCATATTATAAAAAATATATATTTTGTACAAGAGATTGAATTAAGGATGAAGATGAGAGGTGGCGACCTTAGAAAGAAATTCTACAAGCGAACATGTTCTGAAGCCGAGGACATTGTTAGGAGCAAAATCCAGGAACATGTCTCTGCAAGGCCTGAGTTGGCTGCCAAGTTGATCAGAATGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGTTCGGTTTTGCTGGACTCCACTGCCACCAACACAGCAGAGAAGGATTCCATTCCGAACTTGTCTCTGTCTGGCTTCGATGTGATCGATGACATAAAAGCAGCATTGGAGGCAAAATGTCCTGGAACTGTATCCTGTGCTGATATACTTGCATTGGCTGCTAGGGATGCTGTTTCTGTCCAATTCAAAAAGCCTATGTGGGAAGTTCTTACCGGAAGAAGAGATGGGAAAGTATCCATTAGTGGTGAAGCCTTGGCCAACCTGCCAGCACCGTTTTTCAACATCACCCAGCTCAGACAAAGCTTTGAGAGTAAAAAGCTTACGGTGCATGATCTGGTTGTGTTATCAGGAGCACACACAATTGGGGTAGGTCATTGCAACTTATTCAGTAACAGGCTTTTCAACTTCAGCGGAAAGGGTGATCAAGATCCTTCTCTGAATCCTACTTATGCCACTTTTTTGAAGACAAAATGTCAAAGTCTGAGTGACACCACCACTACAGTAGAAATGGATCCTGAGAGTTCAAGCACCTTTGACAATGACTATTATTCTATCCTTATTCAGAACAAGGGTTTATTCCAATCAGATGCTGCCCTTTTAACAGCCAAGGTTTCGAGAAACATTGTGAACGAATTGACGAAACAAGACAAGTTCTTCACAGAGTTTGGACAGTCAATGAAGAGAATGGGAGCCATCGAGGTCCTCACAGGCTCGGATGGAGAAATTAGAACAAAGTGCTCTGTTGTCAACTCTTAA 1929 0.436 MKMRGFLVACLALFCILGVCEGGDLRKKFYKRTCSEAEDIVRSKIQEHVSARPELPAKLIRMHFHDCFVRGCDGSVLLDSTASNTAEKDSIPNLSLSGFDVIDDIKAALEAKCPGTVSCADILALAARDAVSVQFKKPMWEVLTGRRDGKVSISGEALANLPAPFFNLAQLRQSFESKKLTVHDLVVLSGAHTIGVGHCNLFSNRLFNFSGKGDQDPSLNPTYATFLKTKCQSLSDTTTTVEMDPESSSTFDNDYYSILIQNKGLFQSDAALLTAKVSRNIVNELTKQDKFFTEFGQSMKRMGAIEVLTGSDGEIRTKCSHIIKNIYFVQEIELRMKMRGGDLRKKFYKRTCSEAEDIVRSKIQEHVSARPELAAKLIRMHFHDCFVRGCDGSVLLDSTATNTAEKDSIPNLSLSGFDVIDDIKAALEAKCPGTVSCADILALAARDAVSVQFKKPMWEVLTGRRDGKVSISGEALANLPAPFFNITQLRQSFESKKLTVHDLVVLSGAHTIGVGHCNLFSNRLFNFSGKGDQDPSLNPTYATFLKTKCQSLSDTTTTVEMDPESSSTFDNDYYSILIQNKGLFQSDAALLTAKVSRNIVNELTKQDKFFTEFGQSMKRMGAIEVLTGSDGEIRTKCSVVNS 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02677 642 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601|GO:0042744
Viun1g02677 642 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 ProSitePatterns Peroxidases proximal heme-ligand signature. 502 512 IPR019793 -
Viun1g02677 642 Gene3D - 346 641 - -
Viun1g02677 642 FunFam Peroxidase 480 620 - -
Viun1g02677 642 Pfam Peroxidase 41 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 Pfam Peroxidase 359 604 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 SUPERFAMILY Heme-dependent peroxidases 25 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 FunFam Peroxidase 346 489 - -
Viun1g02677 642 SUPERFAMILY Heme-dependent peroxidases 343 641 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 CDD secretory_peroxidase 343 640 IPR033905 GO:0004601|GO:0042744
Viun1g02677 642 Gene3D Peroxidase, domain 2 480 620 - -
Viun1g02677 642 Gene3D Peroxidase, domain 2 162 302 - -
Viun1g02677 642 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Viun1g02677 642 Gene3D - 28 321 - -
Viun1g02677 642 FunFam Peroxidase 162 302 - -
Viun1g02677 642 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Haem peroxidase superfamily signature 374 388 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Haem peroxidase superfamily signature 502 517 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Haem peroxidase superfamily signature 435 452 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Haem peroxidase superfamily signature 454 466 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PRINTS Haem peroxidase superfamily signature 562 577 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 ProSiteProfiles Plant heme peroxidase family profile. 342 641 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 PANTHER PEROXIDASE 25-RELATED 14 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun1g02677 642 ProSitePatterns Peroxidases active site signature. 374 385 IPR019794 GO:0004601
Viun1g02677 642 FunFam Peroxidase 28 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02677 Viun-Chr1 36566539 36573904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02677 343 642 Peroxidase AT1G05260 55.776 2.39e-113 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02677 - - vum:124819628 1169.45