Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02665 ATGGACATGCCTACCATTGATGTGGACCTTGGGCCAGAGAAGTTAGAAGATGAAAAGCAAGCAGGTCCATTGTTGCATTGTGATCTTTGTGATACAGAAGTGATTCATAAGTTGGCACAAATGTTCCTTCCAGGTCTAGCTAGTGCTTGTGTTGATAACACATCAGGAGATCTTTTTAAGACAGCAGGTTCGATAGCTGTTGATATAAGGAAGGAGATGATAGAGTATCTTACCCAAAGAAGTGAATCGTTTGTTGCAGAGTCTGTTATATTAGAAGGTGGTCCAGACGGTGAAGTTTCAGACCATCCTTATGATATAATTTCTAACCTAGTTGATGACTTTGCAAGTTCAAAGAGGAATTTGTTTAGTAGGGTTTCTGGATGGCTACTGAGTGAAAAGAGGGAAGATAATATAGAAGATTTTGTTCAAGAGATGGAAGTGAATGGGTTTTGGACACTCGAGCGGAGGGAAAAAATTGCAGAAACTTTGTTAAAAAATGTTGACTTTGAAAACTCATATCATTGCAGCATGAGTTTTAATTCTGCAGAAGATCTTGCCAATCACCTAGATGATTGCAACTTTAGATCTATAATATGTGAAAATGAGGGGTGTAATTCTAGGTTTTGTGCATCTCATTTGAAGGATCATGATTCGACTTGTCCTTTCAAGATAATTCCATGCGAACAGAAGTGTCCTGCAAACATCATGAGACGTGAGATGGACCGACATTGTATAACTGTTTGTCCGATGAAGCTTGTAAATTGTCCTTTTTATGCTATCGGTTGTCGATCAGCCGTTGCACAATGTATGATTGAAAAACATCGTTCGGATGATATTAATTCTCACTTGTGGCACTTCCTTAAAGGGATTTACAAAGAAGCATCTGGAGATGATCTCACTCGACGAGTGGAAGAAATTATACAGGCATCGCCAAACAATCGTTTAACAGAGGCTCGAGATGCAAGATCTTTGAGCTTTGTTGTCAAGGATATTGAAGCTAAGCTAGAACCTTTCAAAGTAACTGTTGTGGATAAAAGTAATGAAAAGACCGAAGACAAGAATGGTGAAGAAGAAGGCGGGGAAAATAATACGAACAATAGTGAAAGAAGCATAGATACTTCAGATATGTCCAATTCATCAGATAAAGTTGAAGTGAGTGATACACAAAATGCATCAGATAAAGTTGAAGTGAGTAATACACAAAATGCATCAAATAAAATTGAAGTGAGTGATACACAAAATGCATCAGATAAAGTTGAAGTGAGTGATACAAATAATGCATCAGATAAAGTTGAAGTGAGTGATACAAATAATGCATCAGATAAAGTTGAGGTGACTGATACACAGAATGCACCAGATAAAGTTGAAGTGAGTGATACAAAGAATGCATCAGATAAAGTTGAAGTGAGTGATACACAAAATACAACACAAAATGAAGATAATAAGCCTAGTTATGTTGAAAATGAAGATCACGAAGAAAGGACACAAACTTCAAATATGATTAATGTATCTGATACTACTAAAACTGACCTCTTGGATGACAATAATAAAGATGTTGCAACTACCAAATTAACAACTAAGGCAGATGATGAAGAGAGCTCTCAAACACTCAACACAAATATATCCAATGAGGAAGTTGGTGTAAAAAATGAGGACGGTGCAGAGAATAACACTATAAGCAAATCCATTGAAGACAATGAGCAAATATTAAACGAAGATAGTAAATTCGAAGATAAGGACGATGATCAAAATATACATAATTCAAAAATAGAGATCAAGGGTGGTGCAGAGAATAATATCAAGAACAAAGATACTGAAGATGACAACTAA 1830 0.3623 MDMPTIDVDLGPEKLEDEKQAGPLLHCDLCDTEVIHKLAQMFLPGLASACVDNTSGDLFKTAGSIAVDIRKEMIEYLTQRSESFVAESVILEGGPDGEVSDHPYDIISNLVDDFASSKRNLFSRVSGWLLSEKREDNIEDFVQEMEVNGFWTLERREKIAETLLKNVDFENSYHCSMSFNSAEDLANHLDDCNFRSIICENEGCNSRFCASHLKDHDSTCPFKIIPCEQKCPANIMRREMDRHCITVCPMKLVNCPFYAIGCRSAVAQCMIEKHRSDDINSHLWHFLKGIYKEASGDDLTRRVEEIIQASPNNRLTEARDARSLSFVVKDIEAKLEPFKVTVVDKSNEKTEDKNGEEEGGENNTNNSERSIDTSDMSNSSDKVEVSDTQNASDKVEVSNTQNASNKIEVSDTQNASDKVEVSDTNNASDKVEVSDTNNASDKVEVTDTQNAPDKVEVSDTKNASDKVEVSDTQNTTQNEDNKPSYVENEDHEERTQTSNMINVSDTTKTDLLDDNNKDVATTKLTTKADDEESSQTLNTNISNEEVGVKNEDGAENNTISKSIEDNEQILNEDSKFEDKDDDQNIHNSKIEIKGGAENNIKNKDTEDDN 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02665 609 MobiDBLite consensus disorder prediction 346 363 - -
Viun1g02665 609 ProSiteProfiles Zinc finger TRAF-type profile. 211 263 IPR001293 GO:0008270
Viun1g02665 609 MobiDBLite consensus disorder prediction 467 482 - -
Viun1g02665 609 MobiDBLite consensus disorder prediction 364 457 - -
Viun1g02665 609 SUPERFAMILY TRAF domain-like 199 271 - -
Viun1g02665 609 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 215 280 IPR013083 -
Viun1g02665 609 MobiDBLite consensus disorder prediction 346 609 - -
Viun1g02665 609 Pfam TRAF-type zinc finger 216 274 IPR001293 GO:0008270
Viun1g02665 609 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 24 493 - -
Viun1g02665 609 MobiDBLite consensus disorder prediction 566 588 - -
Viun1g02665 609 MobiDBLite consensus disorder prediction 531 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02665 Viun-Chr1 36460182 36463007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02665 - - ccaj:109798141 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02665 1 36460182 36463007 Viun1g02665 1 36460182 36463007 ECH
Viun1g02665 1 36460182 36463007 Viun7g00269 7 1894239 1897218 PCT