Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02592 ATGGCCGATAAGCAACCCCACCTGAACGGCGCCTATTACGGTCCAGCCATTCCTCCGCCGGCGCAACCACGCTACCGCCATCACCATGGAAGAACCTGTTGTTGCTGTCTCTTCGGAATCTTGTGGAAGATTCTGGTTACACTCATCGTCCTGGTTGGCCTCGCAATCCTCATATTCTGGCTGGTTGTTCAACCCCGCTCCTTCAAGTTCCATGTCACGGAAGCTGACCTAACCCAATTCGACTACAACGCCGACAACAGCACCCTCCAGTACAGCATGGTCCTCAACTTCACCGCACGCAACCCCAACAAAAAACTCAACATCTACTACGACAAAGTGGAGGCATTAGCATTCTACGAGGATGCCAGATTCTCCAATTACGATGTCATAACGCACATGAACTCGTTCCGGCAGTACACGAAGAGCAGCAGCCCCATGAGCGCTGTTTTCTCAGGCGAGAAGGTGGTGATACTAGACAATGGACAAGTGTCTGAGTTGAACCAAGACAAGAGTGATGGCGCTTACGACTTCTATGTGAGGCTCAACTTCAGGATTCGATACAGACTCGGGGATCTCATATCTGGTGACTTCAAACCCAAGGTTAAATGTCACATCAAGGTTCCCTTAGCCAACAATGGCTCTGAAACTTTGTTTCAGACCACCAAGTGCGACGTCGATTACTAG 684 0.5029 MADKQPHLNGAYYGPAIPPPAQPRYRHHHGRTCCCCLFGILWKILVTLIVLVGLAILIFWLVVQPRSFKFHVTEADLTQFDYNADNSTLQYSMVLNFTARNPNKKLNIYYDKVEALAFYEDARFSNYDVITHMNSFRQYTKSSSPMSAVFSGEKVVILDNGQVSELNQDKSDGAYDFYVRLNFRIRYRLGDLISGDFKPKVKCHIKVPLANNGSETLFQTTKCDVDY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02592 227 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
Viun1g02592 227 PANTHER OS05G0367900 PROTEIN 31 211 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02592 Viun-Chr1 35986162 35987087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02592 62 216 SNARE and Associated Proteins AT1G32270 32.258 1.70e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02592 - - gmx:100807701 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02592 1 35986162 35987087 Viun7g00167 7 1215847 1216908 PCT