Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02591 ATGTCGCAGTTGAACGGAGCCTACTACGGCCCCGCTATTCCGCCGCAGAAGTCCTACAACCGCCCAGGGCGCGGCGGCGGGCTTGGCTGCTGCTGCGGCTGCCTCTTCAGCTGCATCTTCAGCCTCATCTTCAAGGTGATTTTCACGCTGATCATCATCGTGGCCATCGCCGTGTTCATCTTCTGGCTCATAGTCCGTCCCAACATGGTGAAATTCCACGTCACTGACGCCACCCTCACGGAGTTCAACTACTCCAACAACACCCTCCACTACGATCTTGCCCTGAACATCACAGTGCGCAACCCTAACAAGAGGCTGGGTATCTACTACGACTTCATCGAGGCGCGTGCATTGTTCCACGACGCCAGGTTCAACTCCCAGTACCCCAATCCCTTCTACCAGGGGCACAAGACCACGAACGTGCTGAACCCCGTCTTCAAGGGGAACCAAGTGATGGCTTTGGACGCTGACCAGAGCGCCGAATTGAGCAAGGAGAACTCCACCGGGTTGTATGAGATCGATGTGAAGATGTACCTGAGGGTGAGGTTCAAGTTGGGCGCTTTCAAGACCAAGACACTCAAGCCCAAAGTTAGCTGCGACTTGCGCGTGCCTTTCAAGGGAACCGCCACCGCCTTTCAAACCACCAAGTGCGACTGGGATCGCTGA 666 0.5616 MSQLNGAYYGPAIPPQKSYNRPGRGGGLGCCCGCLFSCIFSLIFKVIFTLIIIVAIAVFIFWLIVRPNMVKFHVTDATLTEFNYSNNTLHYDLALNITVRNPNKRLGIYYDFIEARALFHDARFNSQYPNPFYQGHKTTNVLNPVFKGNQVMALDADQSAELSKENSTGLYEIDVKMYLRVRFKLGAFKTKTLKPKVSCDLRVPFKGTATAFQTTKCDWDR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02591 221 Pfam Late embryogenesis abundant protein 96 199 IPR004864 -
Viun1g02591 221 PANTHER OS05G0367900 PROTEIN 30 205 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02591 Viun-Chr1 35976960 35978030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02591 64 205 SNARE and Associated Proteins AT1G32270 38.194 1.55e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02591 - - gmx:100793187 357.836