Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02575 ATGGGCAAGAAACTGAAGCTTCCTTCCCTCCTCCCCAAGAACTCACACCCCAAACCTTCTTCCACTTCATGGCCATGGCCTTCTTGCCACCAACCAAGAACCCTCTCTTTTCGAGACCAAAACGACGTCGCTTTCAAAACCATCAACCCCGCCTACTTCGACATGCCCGAGAGCTCCCGCTCCTTCTTCACTGTCTCCCCTGACTCCGGAAGCTTCTCCACCGCTTCAGAAGAAGATTCTAGAAGACCCGATTCCCTCGAGACCCTCATTCGCCCCTTGCGTTCCGACCGTTTCTTCTTCCACCCCGACCAGACAAGTTCCATATTAGAGTCCAAAGCAGGAACAGGAACATCGACATCGACATCAACACCAACACCAACAACAGAAGCAACTACAACACCAACAACAGAAAAACCTACAGCAGCAACAGCAACAACAACAACGTTGTTGCCCTTCAAAGACAGCGTGGTTATGTCTGTGGAGTCTCAGGACCCTTACGTGGACTTCCTCAGGTCCATGGAAGAGATGGTGGAAGCCCAGTGCGTTAAAGACTTTGATGGTCTCCAAGAGCTTCTATGTTGGTATTTGAAAGTCAATGGAAAAAGCAACCATGGTTATATTGTTGGCGCTTTCATTGATTTATTGGTGGCTTTTTCTGATATAAACTCTCATTCTCCTTCTTCCCCTTTATCATTCTACAGCTCCTCTCTTTCCTCCTCTTGCAGCACTCACTGCGTTTCATGTTTCGGAGCTGAGGATGAAATTGATACAACTACCCCTAATTCTTCTTTCTTGTTAGAACAAGTTAGGGAAGACCACACTTCATCTTCATCCTCTTTGAATTAA 846 0.4704 MGKKLKLPSLLPKNSHPKPSSTSWPWPSCHQPRTLSFRDQNDVAFKTINPAYFDMPESSRSFFTVSPDSGSFSTASEEDSRRPDSLETLIRPLRSDRFFFHPDQTSSILESKAGTGTSTSTSTPTPTTEATTTPTTEKPTAATATTTTLLPFKDSVVMSVESQDPYVDFLRSMEEMVEAQCVKDFDGLQELLCWYLKVNGKSNHGYIVGAFIDLLVAFSDINSHSPSSPLSFYSSSLSSSCSTHCVSCFGAEDEIDTTTPNSSFLLEQVREDHTSSSSSLN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02575 281 MobiDBLite consensus disorder prediction 109 141 - -
Viun1g02575 281 NCBIfam uncharacterized plant-specific domain TIGR01568 156 218 IPR006458 -
Viun1g02575 281 MobiDBLite consensus disorder prediction 65 84 - -
Viun1g02575 281 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 66 218 IPR038933 GO:0045892
Viun1g02575 281 MobiDBLite consensus disorder prediction 1 29 - -
Viun1g02575 281 Pfam Transcriptional repressor, ovate 162 217 IPR006458 -
Viun1g02575 281 ProSiteProfiles OVATE domain profile. 156 217 IPR006458 -
Viun1g02575 281 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02575 Viun-Chr1 35903350 35904728 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun1g02575 Ovate 6.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02575 - - vun:114179778 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02575 1 35903350 35904728 Viun7g03881 7 38889593 38890861 ECH
Viun1g02575 1 35903350 35904728 Viun1g02575 1 35903350 35904728 ECH