Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02546 ATGTTGGGGAAAAAGATGGTATCTTTCAAGAAACTGGCAAAAAAGGTGAAGGGTGTAGGTGGATTTGACCCTGCTCATCATGAGGGTTTGCTCAAGAACTATGAAGAAAAATGTGTGACTAACTCACCCCCAACAGGGTTTTTTGCTCTTTATGTTGGAGAAGAGCGTCAAAGATACGTGGTTCCAACTCGCTACCTTTCTCACCCCTTGTTCAAGATGCTGCTGGAGAAGGCTTACAATGAGTTTGGGTTTTCGCAGAGGAATGGCCTAGTTGTTCCATGCAGTGTTTCAACGTTTGAGGAGGTGCTGAATGCTATAGAATGCAACAATGGCACGTTTGACCTGGGAAAGTTTTTTGCAGAGTTTGTTTGA 372 0.4382 MLGKKMVSFKKLAKKVKGVGGFDPAHHEGLLKNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGTFDLGKFFAEFV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02546 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 102 IPR003676 GO:0009733
Viun1g02546 123 Pfam Auxin responsive protein 34 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02546 Viun-Chr1 35668770 35669455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02546 12 109 Calmodulin-binding Proteins AT5G20810 43.925 4.64e-22 84.3