Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02518 ATGGTGGTTGAAGAGGGTGAGATGAATTCCCAAGGTGAGGTGGAATCAAGATTCCAGCAAGATGCCAACAAGAACCACCACCATTCTCAGTTCCCACCATCATCCATTGGAACACAACCATCCATATATTCTCTTACACTCGACGAGTTCCAGCACAGTCTATGCGAGACCGGCAAAAACTTCGGTTCCATGAACATGGACGAGTTTATCAGCAGCATCTGGAACGCAGAAGAGAATCAAGCCATAATAACCTCTTCCAACGTCCCTCTCTCCCAACCCTTCACCGACAAAGAACCGACAACTCTAAGGAAACAACCAAGCCTACCTCGCCAACCCTCACTCTCTCTCCCTGCACCTCTATGCAGGAAAACCGTGGATGAAGTTTGGTCCCAGATTCAGAAAGAACAAGACGACACCAACAACAACGGCAATGTTCTGAATAATACCGAGTCTGCCCCTCGCCAGCCCACTTTCGGTGAGATGACCCTGGAGGATTTTTTGGTCAAGGCTGGGGTGGTTCGGGAACAACCATGTGCACCACCACAGTTGTCTCATCACTCTCACCACCTCCATCACCAGCAGCAGCCGCAGCCTCCGCCGCAGCCGCAGCCGCCGCCGCAGCATTACGCGAGTAACAACGGTGCAATGCCGGGAATGGGTTCTTCTTTCGTTGGTAGGAATGTTATTGGTGCAGTGAGTAACGTGGTTGCACCGGGTTACCAAGTGGGGGAGGCTTCTGGTGGGTATGCCGGAAACGGTAAGAGACGGTGGTGGGGGTTTCATCAGCAAGGTGTGTGCTTTGGAGGGAGTGGGTTTGGGATGGGCCCCACGATGGGAATGGGTGGGCCTGTGAGCCCTGCTAATTCTTCTGATGGGATAGGGAATGATTGTGGACAGTTTGGGCTTGAGATGGGTGGTTTGAGAGGTAGAAAGAGGATAGGGGATGGGCCTGTGGAAAAGGTGGTGGAGAGGAGGCAGAGGAGGATGATCAAGAATAGAGAGTCTGCTGCAAGATCTAGAGCCAGAAAACAGGCATACACGGTTGAATTGGAAGCGGAACTAAACCAACTAAAAGAAGAGAACGCCCAACTGAGACAGGCGTTGGCTGAGCTTGAGAGAAGAAGAAAGCAACAGCAGTTTTTGGAAGAATTAAACAGGATTAGCGTTCAAAACAACGCTGAGAAAGTAAAAGACAAACTGAGAACTTTGAGAAGGAACAACAGTTATTCTTAG 1233 0.5053 MVVEEGEMNSQGEVESRFQQDANKNHHHSQFPPSSIGTQPSIYSLTLDEFQHSLCETGKNFGSMNMDEFISSIWNAEENQAIITSSNVPLSQPFTDKEPTTLRKQPSLPRQPSLSLPAPLCRKTVDEVWSQIQKEQDDTNNNGNVLNNTESAPRQPTFGEMTLEDFLVKAGVVREQPCAPPQLSHHSHHLHHQQQPQPPPQPQPPPQHYASNNGAMPGMGSSFVGRNVIGAVSNVVAPGYQVGEASGGYAGNGKRRWWGFHQQGVCFGGSGFGMGPTMGMGGPVSPANSSDGIGNDCGQFGLEMGGLRGRKRIGDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLRQALAELERRRKQQQFLEELNRISVQNNAEKVKDKLRTLRRNNSYS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02518 410 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 322 378 - -
Viun1g02518 410 Gene3D - 322 379 - -
Viun1g02518 410 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 39 377 IPR043452 GO:0003700|GO:0045893
Viun1g02518 410 MobiDBLite consensus disorder prediction 134 156 - -
Viun1g02518 410 Coils Coil 386 406 - -
Viun1g02518 410 CDD bZIP_plant_BZIP46 324 378 - -
Viun1g02518 410 SUPERFAMILY Leucine zipper domain 324 374 IPR046347 GO:0003700|GO:0006355
Viun1g02518 410 SMART brlzneu 320 386 IPR004827 GO:0003700|GO:0006355
Viun1g02518 410 Pfam bZIP transcription factor 324 376 IPR004827 GO:0003700|GO:0006355
Viun1g02518 410 Coils Coil 340 384 - -
Viun1g02518 410 MobiDBLite consensus disorder prediction 1 38 - -
Viun1g02518 410 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 327 342 IPR004827 GO:0003700|GO:0006355
Viun1g02518 410 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 322 374 IPR004827 GO:0003700|GO:0006355
Viun1g02518 410 MobiDBLite consensus disorder prediction 89 119 - -
Viun1g02518 410 MobiDBLite consensus disorder prediction 133 158 - -
Viun1g02518 410 MobiDBLite consensus disorder prediction 178 218 - -
Viun1g02518 410 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02518 Viun-Chr1 35529490 35533118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02518 1 378 bZIP Transcription Factor Family AT2G36270 48.276 1.02e-97 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun1g02518 bZIP_1 6.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02518 K14432 - gmx:100818567 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02518 1 35529490 35533118 Viun1g02518 1 35529490 35533118 ECH
Viun1g02518 1 35529490 35533118 Viun7g00774 7 6660728 6664626 PCT