Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02509 ATGAACTTCAACAACCAACTCTTTCTTCTTCTCACTCTTTTCTCAGTTCTATTTCTCTCAGGAGAAAGAGTGTTGCAAGCAGAGGCTGGCCATCATCATCAGCATCTTCACCATCACCATCACCGTCACCGTCACCATCATGGTCCAACAAAGTTGTTCGTTTTCGGAGACTCATATGCTGACACAGGCAACATTCAGAAAGCTGTTTCAAACTCATGGAAAGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGCAGATTTTCCGACGGTAGAGTCCTCACCGATTACATTGCTAAGTATTTGAAAGTGAAATCACCAATTCCCTACAGATACAGAAAATTGATGCCACAGCATGTAAAATATGGGATGAACTTTGCGTTTGGAGGTACCGGTGTGTTCAACACGTTGGTTCCACTTCCGAACATGACAACCCAGATCGATTTCTTGCAACAGCTCATCAAAGACAAAGTCTACTCTGCCTCAGATCTCAGCAACTCAGTTGCACTTGTTTCTGTCGCTGGAAATGACTACAGTCATTTCACGCAAACAAATGGCTCTGAGGGTTTACCATCTTTCGTGGCTTCAGTGATTAACCAAACAACGATGAATCTGATGCGCATAAGAGAGCTGGGAGTGAAGAAAATAGTGGTGGGTGCTCTGCAACCCATTGGATGTCTTCCGCGGATCACAGCCTCAACCTCATTCCAACGTTGCAACGAAACCTCCAACGCCTTGGTGTTTCTCCACAACACCCTCTTGAACGATGCAGTGACAACGTTAAACCAACAAACCAAGGACCGTTCCACATTCCTGATTCTTAACCTCTTCGACAGCTTCATGTCGGTGTTGAACCACCCTTCCACGCACAACATTCGGGACAGTTTGAAGCCATGTTGTGTTGGTGTGAGCAGTAACTACTCGTGCGGGAGTGTGGACAACAATGTTAAGAAATATAGGGTATGCAATGATCCAAAATCTGCTTTCTTTTGGGATTTTGTGCACCCTACACAAGCTGGATGGCATGCAGTGTACAACAAGTTGCGAACCATGAACGATCTTCAACGGATTCTTTACTAG 1083 0.4571 MNFNNQLFLLLTLFSVLFLSGERVLQAEAGHHHQHLHHHHHRHRHHHGPTKLFVFGDSYADTGNIQKAVSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLKVKSPIPYRYRKLMPQHVKYGMNFAFGGTGVFNTLVPLPNMTTQIDFLQQLIKDKVYSASDLSNSVALVSVAGNDYSHFTQTNGSEGLPSFVASVINQTTMNLMRIRELGVKKIVVGALQPIGCLPRITASTSFQRCNETSNALVFLHNTLLNDAVTTLNQQTKDRSTFLILNLFDSFMSVLNHPSTHNIRDSLKPCCVGVSSNYSCGSVDNNVKKYRVCNDPKSAFFWDFVHPTQAGWHAVYNKLRTMNDLQRILY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02509 360 PANTHER OSJNBB0059K02.9 PROTEIN 14 356 - -
Viun1g02509 360 SUPERFAMILY SGNH hydrolase 48 349 - -
Viun1g02509 360 CDD SGNH_plant_lipase_like 52 349 IPR035669 -
Viun1g02509 360 Pfam GDSL-like Lipase/Acylhydrolase 52 348 IPR001087 GO:0016788
Viun1g02509 360 Gene3D SGNH hydrolase 35 355 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02509 Viun-Chr1 35458728 35461659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02509 50 345 Pollen Coat Proteome AT1G75930 27.245 5.23e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02509 - - gmx:100818373 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02509 1 35458728 35461659 Viun1g02509 1 35458728 35461659 ECH
Viun1g02509 1 35458728 35461659 Viun7g00789 7 6841187 6846053 PCT