Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02508 ATGGAGTTTCAACCATTTTCTCTGTTCTCTCTCATGCACCTCTTCTCCACCGTCTCCTATGGCACACTGTGTCTTTCACTCGCCACAATCACCCTTCTCTCCCTCACTCTTTTATCGTCTCTCTCCTTCAGCTGGCCCAGAATAAACATCTTCTTCTGTAACTGCCAAACTTGCCAGGCCTATCTCACTTCAAGCTGGTCCAAAACCTTCCACAATCTTTGTGATTGGTACGCTCATCTCCTCCGAAACTCCCCCACCAAAACCATCCACATCCACCTCCTCCAAAACACCATCACCGCCAACCCCGACAACGTCAAGTACATTCTTAAAACCAGGTTCCACAACTTCCCCAAGGGGAAAACCTTCTCCGCCATCCTCGCCGATCTCCTCGGCGGAGGAATCTTCAACGTCGACGGAGACTCCTGGTGCTTCCAGAGGAAGATAGCCAGTTTAGAACTCAGCAAGGCCTCCATACGATCCTTCGCTTTCGAGGTCGTCAGATTCGAAATCCAGCACCGACTCCTCCCTCTCCTCGCTCTCTCCAAACAAAACGACTGTGTTTTGGATTTGCAGGATGTGTTCAAGAGATTCTCCTTCGACAGCATTTGTAAATTCTCCTTCGGGTTGGACCCTATGTGCCTTGAGCAGTCTTTGCCTATATCGGACTTCGCTCTTTCCTTTGACTTGGCGTCAAAGTTGTCCGCGGAGAGAGCCATGTCGGTGTCCCCTCTAATTTGGAAGATAAAAAGGTTCTTCAACGTGGGCTCGGAGAAGAAGCTACAAGAAGCGGTTAAAAAGATCAACATCTTAGCGAAGGAGGTGATAAGACAAAGAAGAAAAACGGGGTTTTCGTCTCACAGGGACCTTTTGTCACGGTTCATGAGCTGTGTGAATGATGAGACATACCTGAAAGATATCATCGTGAGTTTCTTACTAGCTGGTCGTGACACCGTGGCTTCGGCTCTGACCAGCTTTTTCTGGCTAGTGGCAAAACACCCCGAAGTGGAGTCGAAGATTGTGGTGGAAGCAGAGGGAGTAATAAGAGGAGAGAAGTGGAGCTTCGAGGAGCTTCAAGAACTGCACTATTTAGAAGCGGCGGTGTATGAGAGCATGAGACTGTACCCTCCGATTCAATTGGATTCAAAGTTTTGTTTGGAGGATGATGTGTTGCCTGATGGGACTTTGGTGAAGGGAGGGACTAGGGTTACTTACCATCCTTACGCAATGGGTCGTTTGGAGGAAATATGGGGTTGGGATTGCTTGGAGTTCAGGCCGGAGAGGTGGTTGAAGAATGGTGTGTTTTGCCCCGAGAACCCGTTCAAGTACCCGGTTTTTCAAGCGGGTATGAGGGTGTGTTTGGGCAAAGAAATGGCTGTGTTGGAGCTCAAGAGTGTGGCCATTTCGTTGCTTCGGAGGTTCCACATCGAACAGGTGGCACCGCATCATCACACCCCGCGTTTCTCCCCTGGCCTCACTGCTACTTTAAGTTGCGGCCTTCGCGTGAAGGTGCGTGATCAAGGTACCCAACAGCGGCAACACCCTCTTCATCATTCACAATAA 1560 0.4968 MEFQPFSLFSLMHLFSTVSYGTLCLSLATITLLSLTLLSSLSFSWPRINIFFCNCQTCQAYLTSSWSKTFHNLCDWYAHLLRNSPTKTIHIHLLQNTITANPDNVKYILKTRFHNFPKGKTFSAILADLLGGGIFNVDGDSWCFQRKIASLELSKASIRSFAFEVVRFEIQHRLLPLLALSKQNDCVLDLQDVFKRFSFDSICKFSFGLDPMCLEQSLPISDFALSFDLASKLSAERAMSVSPLIWKIKRFFNVGSEKKLQEAVKKINILAKEVIRQRRKTGFSSHRDLLSRFMSCVNDETYLKDIIVSFLLAGRDTVASALTSFFWLVAKHPEVESKIVVEAEGVIRGEKWSFEELQELHYLEAAVYESMRLYPPIQLDSKFCLEDDVLPDGTLVKGGTRVTYHPYAMGRLEEIWGWDCLEFRPERWLKNGVFCPENPFKYPVFQAGMRVCLGKEMAVLELKSVAISLLRRFHIEQVAPHHHTPRFSPGLTATLSCGLRVKVRDQGTQQRQHPLHHSQ 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02508 519 Coils Coil 260 280 - -
Viun1g02508 519 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02508 519 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02508 519 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02508 519 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02508 519 PANTHER CYTOCHROME P450 50 495 - -
Viun1g02508 519 CDD CYP86A 85 488 - -
Viun1g02508 519 SUPERFAMILY Cytochrome P450 71 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02508 519 Pfam Cytochrome P450 85 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02508 519 Gene3D Cytochrome P450 55 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02508 519 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02508 519 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02508 519 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02508 519 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02508 519 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02508 Viun-Chr1 35453616 35455538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02508 52 506 Cytochrome P450 AT2G27690 59.914 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02508 K20624 - gmx:102662117 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02508 1 35453616 35455538 Viun11g01767 11 33652265 33653941 ECH
Viun1g02508 1 35453616 35455538 Viun1g02508 1 35453616 35455538 ECH