Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02503 ATGGGTTCATTCTCAGGCACTTCCGAAATAGTTGAGGCAAGGGAGGAGCTGAATACAAGGAAAGCTCCTGGGATTTATCGGTACAATTCTGAGTGTAGCACGTCTGAGAAAAGTCACAAACTTTCGATGCTGAAACTCGGATGCAAGGATGATCTAGACGATGATATTAATAAGCTGTTTGAATCAATTGCTCTTAAGTCTTCGTCAAGGGATCTGGGTCTTTTACAAGACGGCACAAGTCCTAGACTGAAAAGTGCGTTAAAAAAGCCAATTACAATGGGTGTTCCTCGGTCCCCAAGAGTTGGGGCTTCTGAGCCTGTTAATTTAAAGCAAGCATTAAGAGACCTTTGCATATCTAAGGCATCGGAAATGGCCGCTATGAAGAGATTATCAAAGTCAACAGCTTCTCCAAGAATATCTGAAGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGTTGAAACCAATCGACCTGGGCCTTCCTCTGTTGAGAGCAAGGAGCGTCAAATTGAAGTAGCTCTTGTGCCAGAAAAAAGTAAGTCCCTTTCATTGGTGAAAACCTCTCAATCTTATCAACCTGCCCAAATCGCATCGTCGAGCCGAAACATTCATTCGTCTCGGCAAATTGCTGTTGCCACCACTCAATATGATTCTGGGACTTCATTGATACAAAGTGATTTGGCATGCCCATCTAGTAAAGTTGGAATTCAGTCACAAAGAGTGGTACCTGTTGAAACAGAAGAACAAGCATCTGCCTCTTCATCTTCTCTTCCTAATACAATTGGAAGCAAGCTAGAGGTGCCCAAAAATGCTTCTTCCCCTAAAAAGTTGGGTAATAAAGCATGTGTGTCAAGTAACGGGAAAAAAGGTAGGTCGCAAACTGAATCTTCATCTACTTCTGCAAATGGCAACAGAGTTAACAAACTGCCACGCCATGCCCCCCGCACTGTTAAATCAGTCATCAAGAACAAGAATCTGACTAAGAAGAAACTAAAGGAGGATTCGGGTTCTGCTTTATGTGGTCCTATGCCCAATGTAGTTAAGAAGCCAGTTCCTGGTACGCCTCGGCTAATTTGTGAGAGATGTAGATGTGCTTTAGAAAATACAAGTGAAGAAAAAAACCAAGATGCTGTGGCATTGGACTCTACCAGTCCTGGAAATGGAGTAAACAAGAGTAATGTACAGTCCGGCTTAAACAAACCTGGTTTGGTGCTAACTGGCGGTAATAAAAGCAAAACAGTTGCAAAAGTCAAGAACTCCAAGTTGAAAGAGCAACTTGAATTTTCGCAAAGCTCTAAAAGTAGTCAAGGGGAGTACAGTAGTAGTACAAGTACCAGTGATGAGAGCAATGTAAGTGGCTCAAGTCGTAGCACTAGGCCTCACATGTCAAAAGATGTCAGATGGGAAGCCATACGACATGTTCAAATGCAGCATGGAGTCTTGAGCTTGAGAAACTTCAATCTCTTGAAGAAGCTTGGTTGTGGAGACATTGGGACCGTATATCTTGCGGAACTAATTGGCACAAGCTGCTTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGGAAAGGAGAAAGAAAATGCCTAGGGCTCAAACTGAAAGAGAAATACTAAGGATCCTGGATCATCCTTTTCTTCCCACAATGTATGCACAATTTACATCAGATAATCTATCGTGTCTTATCATGGAGTATTGTCCAGGAGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGATGTTTTTCAGAGCCAGCAGCAAGGTTCTATGTTGCCGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCTGAAAACATTCTTGTTCGGGAAGATGGCCACATTATGCTCACAGATTTTGATCTGTCCCTGAGGTGTGCTGTAAACCCAACACTTCTGAAATCATCTTCTGATGTCGACCCTGCAAAAATTTCTGGTCTAAGTGTGCAATCAAGTTGCATTGAACCATTCTGCATCGAACCATCTTGTCAAGTTCCATGCTTCAGCCCAAGATTCCTACCTGCGGCTGCAAAAACAAGGAGATTAAAAGCTGATCCTTCTGCCCAGATCAGATCATTGCCACAGCTAGTGGCCGAGCCCACTGATGCAAGATCAAATTCCTTTGTTGGTACACATGAATACCTGGCTCCTGAGATCATCAAAGAAGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTCTATGAACTTTTGTATGGTAGAACACCCTTTAAAGGTTCTAACAATGAAGAAACATTGGCCAACGTAGTGATGCAGAGTCTTAGGTTCCCTGACCACCCATTTGTTAGTTTCCAAGCAAAGGATCTGATTAGAGGGTTGTTGGTTAAGGAGCCTGAAAATCGTTTGGGTTCAGAGAAAGGGGCTGCTGAGATTAAACAGCATCCTTTCTTTGAAGGCCTTAACTGGGCCTTAATTCGTTGCGCTGTCCCTCCAGAACTTCCAGACTATTATGATTATGGAGTTTCAGACATGATTAACTCACAGGTTAAGGGTGCTAAGTACTTAGAGTGTAAAGTAGGAGAGCGTGTAGAATTCGAGTTGTTTTAA 2613 0.4275 MGSFSGTSEIVEAREELNTRKAPGIYRYNSECSTSEKSHKLSMLKLGCKDDLDDDINKLFESIALKSSSRDLGLLQDGTSPRLKSALKKPITMGVPRSPRVGASEPVNLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVVETNRPGPSSVESKERQIEVALVPEKSKSLSLVKTSQSYQPAQIASSSRNIHSSRQIAVATTQYDSGTSLIQSDLACPSSKVGIQSQRVVPVETEEQASASSSSLPNTIGSKLEVPKNASSPKKLGNKACVSSNGKKGRSQTESSSTSANGNRVNKLPRHAPRTVKSVIKNKNLTKKKLKEDSGSALCGPMPNVVKKPVPGTPRLICERCRCALENTSEEKNQDAVALDSTSPGNGVNKSNVQSGLNKPGLVLTGGNKSKTVAKVKNSKLKEQLEFSQSSKSSQGEYSSSTSTSDESNVSGSSRSTRPHMSKDVRWEAIRHVQMQHGVLSLRNFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLERRKKMPRAQTEREILRILDHPFLPTMYAQFTSDNLSCLIMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVNPTLLKSSSDVDPAKISGLSVQSSCIEPFCIEPSCQVPCFSPRFLPAAAKTRRLKADPSAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVMQSLRFPDHPFVSFQAKDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAVPPELPDYYDYGVSDMINSQVKGAKYLECKVGERVEFELF 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02503 870 SUPERFAMILY Protein kinase-like (PK-like) 459 845 IPR011009 -
Viun1g02503 870 MobiDBLite consensus disorder prediction 246 319 - -
Viun1g02503 870 PANTHER FLIPPASE KINASE 1-RELATED 254 839 - -
Viun1g02503 870 FunFam serine/threonine-protein kinase D6PK-like 571 638 - -
Viun1g02503 870 MobiDBLite consensus disorder prediction 426 464 - -
Viun1g02503 870 SMART serkin_6 487 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02503 870 Pfam Protein kinase domain 716 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02503 870 Pfam Protein kinase domain 488 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02503 870 ProSiteProfiles Protein kinase domain profile. 487 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02503 870 Gene3D Transferase(Phosphotransferase) domain 1 712 833 - -
Viun1g02503 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Viun1g02503 870 FunFam serine/threonine-protein kinase D6PK-like 714 837 - -
Viun1g02503 870 MobiDBLite consensus disorder prediction 278 307 - -
Viun1g02503 870 FunFam Serine/threonine-protein kinase D6PK-like 485 570 - -
Viun1g02503 870 MobiDBLite consensus disorder prediction 372 403 - -
Viun1g02503 870 CDD STKc_phototropin_like 487 837 - -
Viun1g02503 870 Gene3D Transferase(Phosphotransferase) domain 1 567 635 - -
Viun1g02503 870 MobiDBLite consensus disorder prediction 371 411 - -
Viun1g02503 870 MobiDBLite consensus disorder prediction 246 268 - -
Viun1g02503 870 MobiDBLite consensus disorder prediction 426 460 - -
Viun1g02503 870 Gene3D Phosphorylase Kinase; domain 1 485 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02503 Viun-Chr1 35397436 35402206 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02503 1 870 AGC Kinase Gene Family AT3G52890 51.258 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Viun1g02503 Pkinase 3.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02503 - K08286 gmx:100792120 1441.02