Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02475 ATGGAGTTTTGGGGTGTTGAGGTGAAAAGTGGAGAATCTCTCAAAGTTGATCCAGGAGACGACAAGATTATCCACCTTTCAAATGCATGCCTGGGCGATGTGACTAAGGCTAAAGGAGGTGAATCGGTGGCCCTGAATGTGAAGTTTGGTAACCAGAAGCTTGTGCTTGGAACGCTTTCTACGGCTAAATTTCCTCAAATATCTTATGATTTGATATTTGAGAAGGAATTTGAGCTATCCCATAGTTGGAAAAATGGGAGTGTCTTCTTTACTGGATTTAAAGCTCAATCTCAGTCGGAGTCTGATAATGATGAAGATTCTGATGATCTTGATGAAGATATTCCAGTTAGTGCTGCCAATGGTAAACCTGAGTTTGAGGTGAAGCATGGTGTCAAACCTGATGAAGCTAAACAGAAGAAGACAACAGATCCAAAGAAGAATGAGAAGGTTAAGGAAAAGGATGCAAATGGTGAAGATGAAGATTCATCCGAATCTGATTCTGACGGTGATTCAAGTGAAGATAAGCCCACAGCAAATGGTGACATAGAAAGTAGCGAAGGTGATGAGGACAGTGATGATGAGGATGATGACGAGGATGAGGATGATGAAGAATCTGATGAGGAGACACCCAAGAAGATTGAAGCAGGCAAGAAGCGGAATATTGACTCTGCCAACAAAACAACTGTCCCTGTGAAGAAGGCAAAATTTGTTACTCCTCAGAAGCCTGGTCATATGACTCAGCTGGGAAAGAAAAATCTAAGTCTTTTCCAGAGCCTGAGGAAGGAGTTGACCGAAAAATCCAAAAATGTTGGGGATACTGAAGTTCCCAACATGCAGGATCCACTAGTAGAGGTTCGAGTACACGGTGGTACAAAAAGAAAGGCAACAATCCCTATTCAGAAGGGTGTCGGAAAGGACATTAAAAGGATTATGACTGAGCTTCTGGGACCGGGATCGTCCTCAGGAATTAAGAGACCTGAGGTTGGTCTCATAGAGTTGCCGGAGACAACCGTTGGCTGTGACATCGAGATCAATTTAGAGGAGGCTGTGTTTTCTTCTCTGGATAACATGGAGCCTATCGCTATGGCAAAGGCAATGGTGGAGTTTAATAGCAAAGCCCTGATCCTGTGTCGAAGAGTGGGCTGCCTGCTGCAGAAGGAACTTAAAGAAGGAGGAAAGGCTAAAATAGAGCAGGTCAATAAAGAGTTAAAGGTGTTGCAGGCTAAGTATGAAGTGGACAAGGCAGCCTGGGATAGGGAGAGGGAAGAGCTAGTTGCCGAGAAAAAACAACTAGGTTCTTGGAAGGTGAGGTGTTTAGATTCAGAGAAGAAAATGAAGGAGAAGATTGAAGATTTGGAGGCGAACAACGACGAATTGAAGGAGAAATATCAGAGGATAGAGAGCGAACTAGAGGATTTGAAGGACTATATAGTTCAGGAGCACATAAATGGCTTCCATAAAGGCTTGAGGCAGGCGGCATTATTTTATAAGGAGGTGGATGCTACGGATCCTCGTTATGATGTGTATAAAGATGTCTTTAAGGGGCGCCTGTTGGACGAGGAAGAGATGGATTCTGACCAGCCCGTGGAAGAGCCTGAAGCTACTGTTGATCCCGCTGTTGAGGAGGAGGTGACGGCGAATGATGAGGCTGAGATTACTACAAAGTGA 1668 0.4424 MEFWGVEVKSGESLKVDPGDDKIIHLSNACLGDVTKAKGGESVALNVKFGNQKLVLGTLSTAKFPQISYDLIFEKEFELSHSWKNGSVFFTGFKAQSQSESDNDEDSDDLDEDIPVSAANGKPEFEVKHGVKPDEAKQKKTTDPKKNEKVKEKDANGEDEDSSESDSDGDSSEDKPTANGDIESSEGDEDSDDEDDDEDEDDEESDEETPKKIEAGKKRNIDSANKTTVPVKKAKFVTPQKPGHMTQLGKKNLSLFQSLRKELTEKSKNVGDTEVPNMQDPLVEVRVHGGTKRKATIPIQKGVGKDIKRIMTELLGPGSSSGIKRPEVGLIELPETTVGCDIEINLEEAVFSSLDNMEPIAMAKAMVEFNSKALILCRRVGCLLQKELKEGGKAKIEQVNKELKVLQAKYEVDKAAWDREREELVAEKKQLGSWKVRCLDSEKKMKEKIEDLEANNDELKEKYQRIESELEDLKDYIVQEHINGFHKGLRQAALFYKEVDATDPRYDVYKDVFKGRLLDEEEMDSDQPVEEPEATVDPAVEEEVTANDEAEITTK 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02475 555 Coils Coil 442 476 - -
Viun1g02475 555 MobiDBLite consensus disorder prediction 125 158 - -
Viun1g02475 555 MobiDBLite consensus disorder prediction 96 226 - -
Viun1g02475 555 Gene3D Nucleoplasmin core domain 1 100 - -
Viun1g02475 555 MobiDBLite consensus disorder prediction 523 547 - -
Viun1g02475 555 MobiDBLite consensus disorder prediction 183 208 - -
Viun1g02475 555 MobiDBLite consensus disorder prediction 519 555 - -
Viun1g02475 555 Coils Coil 389 416 - -
Viun1g02475 555 Pfam Nucleoplasmin-like domain 3 93 IPR041232 -
Viun1g02475 555 FunFam Histone deacetylase HDT1 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02475 Viun-Chr1 35072429 35079485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02475 1 94 C2H2 Transcription Factor Family AT3G44750 59.574 6.01e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02475 - - vun:114187058 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02475 1 35072429 35079485 Viun1g02475 1 35072429 35079485 ECH