Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun1g02463 | ATGAAACACCCTTCTTCCATAAACCTGTCACTGCCATTGTTGCCATTGACATTGGCATTGGCCTTCGCTATTTTCTGTGTTGCAGAGAGTGCATGGCAAAATGATACACTCGCCCTCACCCAATTCCGCCTCCAAACCGACACCCACGGCAACCTTCTCTCCAACTGGACCGGAGGCGACGCCTGCTCCGCCGCGTGGCTTGGCGTGGAATGCTCCCCAAACGGCAGAGTTGTGGGCCTCTCGCTTCCTTCCCTCAACCTCCGTGGCCCAATTGATTCTCTCTCCCCACTTTTATACCTCCGCTTCCTCGACCTCCATGAAAACCGCTTAAACGGTACCGTTTACCCACTCTTAAACTGCACTGCCCTCGAACTCCTCTACCTCTCCCACAATGACTTCTCCGGCGAGATTCCGCCGCATATATCCTCCCTCCGCCTCCTTCTCCGCCTTGACATCTCCGACAACAACATCCGCGGTCCAATCCCCGACCAAGTCGCCAGACTAACCCACCTTCTCACTCTTCGGTTGCAGAACAACGCCCTCTCCGGCCACGTCCCCGACCTCTCTGCTTCACTCCTAAACCTCACCCAACTCAACGTAACCAACAATGAACTTCGTGGCCACGTTCCCGATTCCATGCTTTCAAAATTCGGCAACGCCAGCTTCTCCGGAAACCACGCTCTATGTGGGTCCACCCCGTTGCCCAGATGTTCCGAAACCGAACCAGACACGGAGACCACAATAACCGTTCCTTCAAAACCGAGTTCGTTCCCTCAAACAAGCAGCGTGACTCTCTCTGACACCCCGAAGAAGAAAGGTCTGAGGGCGGGTGTCATAGTGGCCATTGTGGTGGCGGTTTCCGTGTCGGTGCTGGTGGCGATTTCGTTCGTGGTGGCTCACTGCTGCGCGAGGGAAGGGGGAGGCTATGGGTCGGCGATGGGGAGCGAGAGTGGGAAGAGGAAGAGTGGGAGTAGTTCTGGGAGCGAGAAGAAGGTGTATGGAAATGGTGGGAATTTCGATAGAGATAGCGATGGGACGAACACCGAGACGGAACGAAGCAAGCTGGTGTTTTTCGATAGGAGGAACCAGTTTGAGTTGGAGGATCTGCTTCGAGCATCGGCGGAGATGCTGGGAAAAGGGTGCTTGGGAACGGTTTACAGAGCGGTCCTCGACGATGGCTGCACCGTCGCAGTGAAGAGACTGAAAGACGCAAACCCCTGCGAGAGAAACGAGTTTGAACAGTACATGGACGTTGTAGGGAAGCTCAAACACCCCAACATTGTTAGACTCCGAGCTTATTACTATGCCAAAGAAGAAAAGCTTCTTGTGTATGATTATCTCCCCAATGGAAGCTTGCATGCTCTTCTTCATGGTAACCGTGGACCTGGAAGGATTCCATTGGATTGGACAACGAGAATAAGCTTGGTGTTAGGTGCGGCCAGAGGGTTGGCTAGGATTCATGCAGAGTACAACGCGTCCAAGATACCCCACGGGAACGTCAAATCCTCCAACGTGCTTCTCGACAAAAACGGCGTCGCTTTGATCTCCGACTTCGGGTTATCGCTGCTGTTGAACCCGGTTCACGCGATCGCGCGGTTGGGAGGGTACAGAGCGCCGGAACAGGTTGAAGTAAAGAAGCTGTCGCAGGAGGCTGACGTGTACGCTTTCGGGGTGTTGGTGTTGGAGGTGTTGACGGGAAGGGCGCCGTCGACTCAGTACCCTAATTCCGCGGCGCGTCCACGCGTGGAGGATGAGGGTGAGGTGGATCTTCCGAAGTGGGTTCGGTCGGTGGTGAAGGAGGAGTGGACCGCTGAGGTGTTCGACGAGGAGCTGTTGCGGTACAAGAACATCGAGGAGGAGTTGGTGGCGATGCTGCACGTGGGAGTGGCGTGCGTGGCGGCGCAACCGGAGAAGAGGCCGAGTATGATGGAGGTTGTGAAGATGGTTGAGGATCTGAGGGTGGAACAGTCTCCTCTGGGAGAGGATTACGATGAGGCACGGTCACGCAATTCGCTTTCGCCGTCGCTTCCCACCACCGAAGATGGCCTTGCTTAA | 2055 | 0.5533 | MKHPSSINLSLPLLPLTLALAFAIFCVAESAWQNDTLALTQFRLQTDTHGNLLSNWTGGDACSAAWLGVECSPNGRVVGLSLPSLNLRGPIDSLSPLLYLRFLDLHENRLNGTVYPLLNCTALELLYLSHNDFSGEIPPHISSLRLLLRLDISDNNIRGPIPDQVARLTHLLTLRLQNNALSGHVPDLSASLLNLTQLNVTNNELRGHVPDSMLSKFGNASFSGNHALCGSTPLPRCSETEPDTETTITVPSKPSSFPQTSSVTLSDTPKKKGLRAGVIVAIVVAVSVSVLVAISFVVAHCCAREGGGYGSAMGSESGKRKSGSSSGSEKKVYGNGGNFDRDSDGTNTETERSKLVFFDRRNQFELEDLLRASAEMLGKGCLGTVYRAVLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYNASKIPHGNVKSSNVLLDKNGVALISDFGLSLLLNPVHAIARLGGYRAPEQVEVKKLSQEADVYAFGVLVLEVLTGRAPSTQYPNSAARPRVEDEGEVDLPKWVRSVVKEEWTAEVFDEELLRYKNIEEELVAMLHVGVACVAAQPEKRPSMMEVVKMVEDLRVEQSPLGEDYDEARSRNSLSPSLPTTEDGLA | 684 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun1g02463 | 684 | MobiDBLite | consensus disorder prediction | 235 | 269 | - | - | |
Viun1g02463 | 684 | FunFam | Nuclear pore complex protein NUP107 | 32 | 187 | - | - | |
Viun1g02463 | 684 | MobiDBLite | consensus disorder prediction | 311 | 347 | - | - | |
Viun1g02463 | 684 | MobiDBLite | consensus disorder prediction | 317 | 332 | - | - | |
Viun1g02463 | 684 | SUPERFAMILY | Protein kinase-like (PK-like) | 375 | 649 | IPR011009 | - | |
Viun1g02463 | 684 | MobiDBLite | consensus disorder prediction | 657 | 684 | - | - | |
Viun1g02463 | 684 | MobiDBLite | consensus disorder prediction | 237 | 268 | - | - | |
Viun1g02463 | 684 | SUPERFAMILY | L domain-like | 33 | 215 | - | - | |
Viun1g02463 | 684 | Gene3D | Transferase(Phosphotransferase) domain 1 | 447 | 670 | - | - | |
Viun1g02463 | 684 | Gene3D | Phosphorylase Kinase; domain 1 | 341 | 446 | - | - | |
Viun1g02463 | 684 | Pfam | Protein kinase domain | 375 | 647 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun1g02463 | 684 | Gene3D | Ribonuclease Inhibitor | 28 | 119 | IPR032675 | - | |
Viun1g02463 | 684 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 447 | 661 | - | - | |
Viun1g02463 | 684 | ProSiteProfiles | Protein kinase domain profile. | 371 | 652 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun1g02463 | 684 | FunFam | pollen receptor-like kinase 1 | 341 | 446 | - | - | |
Viun1g02463 | 684 | Gene3D | Ribonuclease Inhibitor | 120 | 239 | IPR032675 | - | |
Viun1g02463 | 684 | Pfam | Leucine rich repeat N-terminal domain | 34 | 72 | IPR013210 | - | |
Viun1g02463 | 684 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 21 | 654 | IPR046959 | - | |
Viun1g02463 | 684 | CDD | STKc_IRAK | 377 | 652 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun1g02463 | Viun-Chr1 | 34990154 | 34992540 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun1g02463 | 33 | 680 | Receptor kinase-like Gene Family | AT2G36570 | 65.913 | 0.0 | 836 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Viun1g02463 | Pkinase | 1.5e-34 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun1g02463 | - | - | gmx:100808402 | 1109.75 |