Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02451 ATGCAAATGATTGCTGAATCAAACATGAGACCCTGCTTCCATTTCTGCTATTCCTATACCTTTCTTCTTCTTTTCCTTCTCCTTTCCCATCACACTGCTTCACAGAAGACATGTCCAAACTGTGGCTCTATGCAAGTTCCATACCCTTTGAGCACACATCCAAGTTGTGGTGATCCATACTACAAGCTTCGTTGTGATTCCCACTCTCAAAACCTTTACTTCGACACCCTCAATGGAAGTTCCTATCTCCTTCTCCGAATCATTCCTTCAATCCAACGCATGGTGGTAGAGCCATCACCTTGGTTACCAGGTTCCTGTGTTACACAAGACATGCCCAGAAGCAACGGTATATGGTTGAACCAGTCACTTCCTTTCAATATAACTTCATCCAATACAGTGTTCCTCCTTAATTGCTCTCCACGCCTCTTGGTTTCTCCTCTCAACTGCACTTATTCCAGTGTTTGCCATCGTTACTTGGAGAGTTCAGGTCACGTTGACACAAAACGAGCGCTTGAATGTGCGAGTGGTCTTCACCCTTGTTGCACTTTTCTAGCTGGAGGGATACCTTCAGCATACAGGATCAGGCTCCATGAGTCTGGCTGCAAAGCTTTCAGAAGCGTTCTTCATTTGAACCAAGACAAGCCTCCTAATCAGTGGGAGGAAGGGCTTGAAATTCAATGGGCTCTTCCACCTGAACCAGTGTGCAAGACGCAGAAGGATTGCTCTGGAGACTCTACGTGTTCCCCTTCTGGTAGAAGTGGCTTATTTCGCTGTCTTTGTAATGGGGGACACCGTTGGGACCCTTTTGTCACAACGTGTGTGAGGTATGAGAGAAAACCCAAATGGAAAACCAGCTTGGTGGTTTCAATAGGGGTGGTTGTTACCTTTTTCTCTCTTCTTGTGGTTCTGACCATCATCTCGAAGTCCCGGAAGATCTCAACCTATAGAGATAACAAAGCGAAGGAAAGAGAAGAGAAGCTGAAATCAAGTGGTGGGGAGAAGCCTTGCAGGATGTTTCAACTGAAAGAGGTGAAGAAAGCAACAAATGGTTTTTCCCAACAGAGGTTCTTGGGGAGTGGTGGCTTTGGGGAAGTTTACAAAGGTGAGCTACAAGATGGAACATTAGTGGCAGTGAAGAAAGCCAGAGTGGGAAACCTGAAAAGCACCGAACAAGTGCTTAACGAGGTTGCAATACTGTCTCAAGTGAATCACAAGAACTTGGTGAGGCTCTTGGGGTGCTGTGTGGAATCTGAGCTACCATTTATGATCTACGAGTATATCTCAAATGGGACCCTCTACGATCATCTTCATGGCAGGTATTGTTCCAACTTTCTAAACTGGAAAACCAGGCTCAAGGTTGCTTTTCAAACTGCAGAAGCATTGGCGTATCTTCATTCTGCTGCACACACACCCATCTACCACAGAGATGTTAAGTCAACAAACATACTATTGGATGATGATTTCAATGCCAAGGTCTCAGATTTTGGACTCTCCAGATTGGCTAGCCCGGGACTGAGTCACGTTTCAACATGTGCTCAGGGAACGTTGGGGTACTTGGATCCTGAATACTACCGCAATTACCAGTTAACAGATAAAAGTGATGTTTATAGTTATGGGGTTGTGTTGCTAGAGCTTTTGACTTCACAGAAAGCGATTGATTTCAATCGTGACGAAGATGATGTGAACCTGGCAATTCATGTGAATCAACGTGCGAGCAATGGTACAATCATGGAATTGGTGGATCAAAGGCTTGTTTCCGTGGAGAGTTGTGGGGATAAAATGTTGACAAGCATAGAACTGTTCTTGGAGCTTGCACTTGAATGTCTGAGAGAGAAGAAAGGTGAAAGGCCTAGTATGAAGGACATTGTTGAACGCCTACTCTGCATGATTAGGATTGTAGAATGA 1905 0.4488 MQMIAESNMRPCFHFCYSYTFLLLFLLLSHHTASQKTCPNCGSMQVPYPLSTHPSCGDPYYKLRCDSHSQNLYFDTLNGSSYLLLRIIPSIQRMVVEPSPWLPGSCVTQDMPRSNGIWLNQSLPFNITSSNTVFLLNCSPRLLVSPLNCTYSSVCHRYLESSGHVDTKRALECASGLHPCCTFLAGGIPSAYRIRLHESGCKAFRSVLHLNQDKPPNQWEEGLEIQWALPPEPVCKTQKDCSGDSTCSPSGRSGLFRCLCNGGHRWDPFVTTCVRYERKPKWKTSLVVSIGVVVTFFSLLVVLTIISKSRKISTYRDNKAKEREEKLKSSGGEKPCRMFQLKEVKKATNGFSQQRFLGSGGFGEVYKGELQDGTLVAVKKARVGNLKSTEQVLNEVAILSQVNHKNLVRLLGCCVESELPFMIYEYISNGTLYDHLHGRYCSNFLNWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDDFNAKVSDFGLSRLASPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFNRDEDDVNLAIHVNQRASNGTIMELVDQRLVSVESCGDKMLTSIELFLELALECLREKKGERPSMKDIVERLLCMIRIVE 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02451 634 CDD STKc_IRAK 357 626 - -
Viun1g02451 634 SMART serkin_6 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02451 634 SUPERFAMILY Protein kinase-like (PK-like) 331 626 IPR011009 -
Viun1g02451 634 Gene3D Phosphorylase Kinase; domain 1 310 426 - -
Viun1g02451 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Viun1g02451 634 Gene3D Transferase(Phosphotransferase) domain 1 427 632 - -
Viun1g02451 634 FunFam Wall-associated receptor kinase-like 20 427 634 - -
Viun1g02451 634 ProSiteProfiles Protein kinase domain profile. 351 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02451 634 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 323 426 - -
Viun1g02451 634 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Viun1g02451 634 Pfam Protein kinase domain 352 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02451 634 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 626 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02451 Viun-Chr1 34899660 34901988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02451 33 633 Receptor kinase-like Gene Family AT5G02070 47.528 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun1g02451 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02451 - - gmx:100804678 1145.18