Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02443 ATGGACACAGTTCTGGTACCTCCGTGGCTGGAACAACTTCTTCACACACCTTTCTTCAACGTGTGTCGAATTCACGCAGACGCAGCTAGGAGTGAATGTAACATGTTTTGTCTAGATTGCAATGGCGAAGCCTTCTGTTTCTATTGCCGTTCTTCTCGACACAAAGATCATCGAGTCATTCAGATAAGAAGATCTTCGTATCATGATGTAGTGAGGGTGGCCGAAATTCAGAGGGTGTTGGACATAAGTGGAGTACAGACATATGTGATAAACAGTGCTCGAGTTTTGTTCTTGAATGTGAGGCCACAACCAAAATCTGGGAAAGGAGTTGCTCACATTTGTGAGATTTGTGGAAGGAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGATGTAAGCTTGAAGGAATAAAGAAAAATGGGGATGCAAGCTTTGCTTTGGATGGTAGGAACGAAGAATTAACAATGGAGACTACCACCACCACCACTACTTCAACTTCAAGAGGATCGGTCTCATCAAATCAGCAAGAAGAAGGATTGCGTGAAGGTTCAACACAAGACATGTATCAAGCCACACCTCCTTCAAACGCAAGGAGAAGAAAAGGAATTCCTCATAGGGCACCCTTTACCTCCTAG 636 0.4434 MDTVLVPPWLEQLLHTPFFNVCRIHADAARSECNMFCLDCNGEAFCFYCRSSRHKDHRVIQIRRSSYHDVVRVAEIQRVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLEGIKKNGDASFALDGRNEELTMETTTTTTTSTSRGSVSSNQQEEGLREGSTQDMYQATPPSNARRRKGIPHRAPFTS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02443 211 Pfam PLATZ transcription factor 63 134 IPR006734 -
Viun1g02443 211 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 209 - -
Viun1g02443 211 SUPERFAMILY B-box zinc-binding domain 19 64 - -
Viun1g02443 211 MobiDBLite consensus disorder prediction 153 193 - -
Viun1g02443 211 MobiDBLite consensus disorder prediction 150 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02443 Viun-Chr1 34857138 34858951 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun1g02443 PLATZ 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02443 - - gmx:100803076 379.793