Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02388 ATGGAGGTTGGAAAGAAGAAGATGCTCAAGTCTTTGATCTCAAAGGTCATAAAGGGTCTTCCGTTATTCTTGGCACCCAATGGAGCGCGTACGAGAAGGGTTTGCTATGTGAGTGACATTGACGAGGAAAACGAAAACGCGACATGGGTGCCGGAAGATGTTAAGGAAGGACATTTTGCTGTTATTGCAATGCATGGTGAAGAGACCAAAAGGTTCGTTGTTGAGTTGGATTATTTAACTGATCCTGCTTTCTTGAAGCTTCTGGAGCAAGCTCGTGAAGAGTATGGGTTTCGACAGAAGGGTGCACTTGCAGTTCCTTGCAGCCCTGAAGAACTTCAGAAGATTATAGAGAATAAACGACTCAATTAG 369 0.4417 MEVGKKKMLKSLISKVIKGLPLFLAPNGARTRRVCYVSDIDEENENATWVPEDVKEGHFAVIAMHGEETKRFVVELDYLTDPAFLKLLEQAREEYGFRQKGALAVPCSPEELQKIIENKRLN 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02388 122 Pfam Auxin responsive protein 39 116 IPR003676 GO:0009733
Viun1g02388 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02388 Viun-Chr1 34334317 34335019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02388 39 117 Calmodulin-binding Proteins AT5G20810 40.506 9.85e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02388 - K14488 gmx:102661602 216.853