Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02378 ATGAAGGGAAAGTTTCTGAGAGGGTGTCTTAACAAGTGGAAGAAAGTGGGGAGTCGAGTGATCCAGTGTGGTGCCTACGGTTACTGCTGCGAATGGGAAGTGTGGCCATCGATGCAGAACGAAGGAGAATCTGATATTCCCAACGATGTGCCAAAGGGTCATTTGGTTGTGTACGTGGGAGAACAGCACAAGAGATATGTGATCAAGATCACGTTGCTCCATCATCCTCTCTTCAAGACCTTGCTGGATCAGGCTCAGGATGAGTACGATTTCATTGCTGACTCAAAGCTCTATATTCCTTGCACTGAGCATCTTTTCCTCACTGTTCTTCGCTGCGCAACCTCTCCGCATAACCAACGACTCTCTCTCTGTGTCTGA 378 0.4815 MKGKFLRGCLNKWKKVGSRVIQCGAYGYCCEWEVWPSMQNEGESDIPNDVPKGHLVVYVGEQHKRYVIKITLLHHPLFKTLLDQAQDEYDFIADSKLYIPCTEHLFLTVLRCATSPHNQRLSLCV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02378 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 108 IPR003676 GO:0009733
Viun1g02378 125 Pfam Auxin responsive protein 41 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02378 Viun-Chr1 34269386 34269928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02378 44 120 Calmodulin-binding Proteins AT4G34750 43.210 7.86e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02378 K14488 - gmx:100793017 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02378 1 34269386 34269928 Viun1g02378 1 34269386 34269928 ECH
Viun1g02378 1 34269386 34269928 Viun7g00984 7 9865410 9866026 PCT