Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02357 ATGAGTGTCATCGACATTCTCACCAGAGTTGATTTCATCTGTAAAGAGTACGATAAATACGACGTCGAAAAACAAAGGGATTCCAATATCTCCGTCGATGTCGAAATCGAGGCCTTACTTCAGACAGCAGAAACCGCTTCCAAGGAGAAAAGTAAGGCGTCTACTGTAGCTATCAATGCCGAGATTCGTCGTACTAAGGCTAGGTTGTTGGAGGAGGTTCCCAAGTTGCAGAATTTGGCTATGAAAAAGGATGGTTCTTCGCTTTCTCTGCTTCTTGAATCGCAGGTAAAGGGGCTTTCATCACAAGAATTTGCTGCCCGTAACGGTTTGGTTCTTGCATTGCCGGATAGGATTCAAGCTATCCCAGATGGGACCCCTGCAGTACCCAGACAAACGGGAAGTTGGGCAGCTTCTTCCTCACGTCCTGGAATTAAATTTGATTCAGATGGACAATTTGATGAAGAATACTTCCATCAAACTGAAGAATCAAGTCGATTTAGGCAGGAGTATGAAATGCGTAAAATGAAACTGGATCAAGGTTTGGATATGATAGCCGAAGGATTGGATACTTTGAAAAACATGGCACATGATATGTATGAGGAACTGGATAGACAAGTACCACTGATGGATGAGATTGATGCTGAGGTGGACAAGGCATCTTCCGACCTTAAAAATACCAATGTTAGACTTCGAGACACAGTGAACCAAGTCTTTTTGACTGAAAATCTTATTCTTAAATTTTCATCAGTTTCTAATTGCGTCAGTGATGAATTTTATGTTGAATCTTATATAGTTTTGGTATTCGTCCAGCTTCAGTCCAGTCGAAACTTTTGTATTGATATTGTTTTATTGATTATAATTTTGGGAATTGCTGCCTATTTGTACAAGTAA 891 0.404 MSVIDILTRVDFICKEYDKYDVEKQRDSNISVDVEIEALLQTAETASKEKSKASTVAINAEIRRTKARLLEEVPKLQNLAMKKDGSSLSLLLESQVKGLSSQEFAARNGLVLALPDRIQAIPDGTPAVPRQTGSWAASSSRPGIKFDSDGQFDEEYFHQTEESSRFRQEYEMRKMKLDQGLDMIAEGLDTLKNMAHDMYEELDRQVPLMDEIDAEVDKASSDLKNTNVRLRDTVNQVFLTENLILKFSSVSNCVSDEFYVESYIVLVFVQLQSSRNFCIDIVLLIIILGIAAYLYK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02357 296 CDD SNARE_Qc 176 231 - -
Viun1g02357 296 FunFam Putative syntaxin-71-like 171 232 - -
Viun1g02357 296 SUPERFAMILY SNARE fusion complex 166 231 - -
Viun1g02357 296 SMART tSNARE_6 166 233 IPR000727 -
Viun1g02357 296 Coils Coil 59 79 - -
Viun1g02357 296 Gene3D - 178 236 - -
Viun1g02357 296 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 178 233 IPR000727 -
Viun1g02357 296 Coils Coil 209 229 - -
Viun1g02357 296 PANTHER SYNTAXIN 34 276 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02357 Viun-Chr1 34033263 34035506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02357 1 295 SNARE and Associated Proteins AT3G09740 59.740 1.26e-122 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02357 K08506 - gmx:100804155 382.489