Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02344 ATGACTTCGAGTTCGCAGATAAAGTTCCTCCTTCGTTCGATCGAGTGCTGTAGTTTTATAAATAAGCGACTCATCCTTCAAGAGGACTATAATTCACATGCCTCAAACCAAGGGTTCAACCCAGGCTTAATTGTCCTCCTGGTTGTTGGTGGGTTGCTGTTGACATTCCTCGTTGGAAATTTTGTGCTCTACACGTATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCTGTTTCAAAGAAAAAGATGAAGAAGGAGAGACTGAAGCAAGGTGTTTCTGCACCTGGAGAGTAG 297 0.4411 MTSSSQIKFLLRSIECCSFINKRLILQEDYNSHASNQGFNPGLIVLLVVGGLLLTFLVGNFVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02344 98 PANTHER DNA-BINDING PROTEIN S1FA2 25 98 IPR006779 GO:0003677|GO:0005634|GO:0006355
Viun1g02344 98 Pfam DNA binding protein S1FA 35 98 IPR006779 GO:0003677|GO:0005634|GO:0006355
Viun1g02344 98 MobiDBLite consensus disorder prediction 73 98 - -
Viun1g02344 98 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02344 Viun-Chr1 34004209 34006111 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Viun1g02344 S1FA 2.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02344 - - vun:114173254 165.622