Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02343 ATGGCCGATGACTTCGAGTTCGCAGATAAAGTTCCTCCTTCGTTCGATCGAGTGGCCTCAAACCAAGGGTTCAACCCAGGCTTAATTGTCCTCCTGGTTGTTGGTGGGTTGCTGTTGACATTCCTCGTTGGAAATTTTGTGCTCTACACGTATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCTGTTTCAAAGAAAAAGATGAAGAAGGAGAGACTGAAGCAAGGTGTTTCTGCACCTGGAGAGTAG 252 0.4722 MADDFEFADKVPPSFDRVASNQGFNPGLIVLLVVGGLLLTFLVGNFVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02343 83 PANTHER DNA-BINDING PROTEIN S1FA2 1 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Viun1g02343 83 MobiDBLite consensus disorder prediction 59 83 - -
Viun1g02343 83 Pfam DNA binding protein S1FA 20 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Viun1g02343 83 MobiDBLite consensus disorder prediction 59 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02343 Viun-Chr1 34004209 34006145 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Viun1g02343 S1FA 3.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02343 - - gmx:100500059 125.176