Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02333 ATGGGGAGGAAGGGAAATTGGTTTTCAAGCGTGAAGAAAGCTCTCAGCCCTGACTCAAAGGAGAAGAAAGATCAGAAATCAAGTAAATCTAAGAAGAAATGGTTTGGGAAGCAAAAATTACAGACTTCTGTCTCATACTCAGAAGCTGATAAGCTGCCACCAGCACCATCTGTTCCTCTGCCAGAAGAGATTAAAGTAACAGATATTGAAAATGAAATCAGTCATGATCATGATCATGTTGTTCAAGTTGTAACTGCCGTTGAAGCCGAGGTATCTGTTCCTCCTGTTCAGATAGAAACTGTTAGGGTTGAAGCTGCCCGAATTCCTCGTTTTGCTGGTAAACCAAATGATGAAGTGGCAGCAATCAAAATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGGGCATTGCGGGCTTTAAGGGGACTGGTCAGGCTGAAATTATTGATGGAAGGGTCGGTTGTAAAACGCCAAGCCACAAGTACCCTCCGATCTATGCAGACATTGTCTCGCTTGCAGTCTCAGATTCGTTCCAGGAGGATCAGAATGCTGGAGGAGAATCAGGCTCTGCAGAGACAGCTCTTACAGAAGCATGCGAGAGAGCTTGAGAGTTTGCGGATGGGAGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAAGCCAAGTTACTAAGCAAGTATGAGGCTGCTATGAGGAGAGAAAGAGCATTGGCTTATGCATTCACTCATCAGCAAAACTGGAAGAACTCATCTAGATCTTTAAATCCTATGTTCATGGATCCAACAAATCCTGCCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCCGGCCATTGGAGAAAGAGTTGAATGATCATGGATCAGTGAAAAGCTCAAGCCGCAGCATTACTGGTGGAGAAATCAGCAAGTCATTTGCTCGTTTCCAGCTCAATTCTGAAAAGCACTCTCCAACAGCCAGCCAAAATCCTGGCTCACCAAGCTTTCAGTCCACTCCTTCCAAGCGAGTTTCGGCATCTGCTAAGAAATCAAAGAAGGCAAGTCCAAGGGGCAGCTGGATTACAGACGAGGACTCTAAAAGCTTGGTGAGTGTCCAGTCAGATCGCTTCCGGAGGCACTCGATCGCAGGTTCATCGGTGAGAGACGACGAGAGCCTTGCTAGCTCTCCAGCCATTCCAAGCTACATGGTTCCAACTCAATCTGCAAAAGCCAAGTCCAGGACTCAAAGTCCATTAGCCCCAGAAAATGGAAAAACTGAGAAAGGATCCTTTGGCACTGCAAAGAAACGGCTATCTTTCCCAGCTTCACCTTCCAGGCCAAGGCGCCATTCAGGTCCACCAAAGGTAGAAATCAGCTTAAATTCCGAGTTATCTGTGGACAAGGTTGTGGACAGTTGA 1404 0.4658 MGRKGNWFSSVKKALSPDSKEKKDQKSSKSKKKWFGKQKLQTSVSYSEADKLPPAPSVPLPEEIKVTDIENEISHDHDHVVQVVTAVEAEVSVPPVQIETVRVEAARIPRFAGKPNDEVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGSVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELESLRMGEEWDDSLQSKEQIEAKLLSKYEAAMRRERALAYAFTHQQNWKNSSRSLNPMFMDPTNPAWGWSWLERWMAARPLEKELNDHGSVKSSSRSITGGEISKSFARFQLNSEKHSPTASQNPGSPSFQSTPSKRVSASAKKSKKASPRGSWITDEDSKSLVSVQSDRFRRHSIAGSSVRDDESLASSPAIPSYMVPTQSAKAKSRTQSPLAPENGKTEKGSFGTAKKRLSFPASPSRPRRHSGPPKVEISLNSELSVDKVVDS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02333 467 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Viun1g02333 467 MobiDBLite consensus disorder prediction 315 340 - -
Viun1g02333 467 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Viun1g02333 467 MobiDBLite consensus disorder prediction 394 418 - -
Viun1g02333 467 SMART iq_5 116 138 IPR000048 GO:0005515
Viun1g02333 467 MobiDBLite consensus disorder prediction 1 60 - -
Viun1g02333 467 PANTHER IQ-DOMAIN 5-RELATED 1 448 - -
Viun1g02333 467 Gene3D - 100 145 - -
Viun1g02333 467 MobiDBLite consensus disorder prediction 315 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02333 Viun-Chr1 33960844 33965083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02333 1 452 IQD Protein Family AT5G03040 55.319 2.94e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02333 - - gmx:100800080 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02333 1 33960844 33965083 Viun1g02333 1 33960844 33965083 ECH
Viun1g02333 1 33960844 33965083 Viun7g01074 7 11241193 11245299 PCT