Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02332 ATGGGGAGGAAGGGAAATTGGTTTTCAAGCGTGAAGAAAGCTCTCAGCCCTGACTCAAAGGAGAAGAAAGATCAGAAATCAAGTAAATCTAAGAAGAAATGGTTTGGGAAGCAAAAATTACAGACTTCTGTCTCATACTCAGAAGCTGATAAGCTGCCACCAGCACCATCTGTTCCTCTGCCAGAAGAGATTAAAGTAACAGATATTGAAAATGAAATCAGTCATGATCATGATCATGTTGTTCAAGTTGTAACTGCCGTTGAAGCCGAGGTATCTGTTCCTCCTGTTCAGATAGAAACTGTTAGGGTTGAAGCTGCCCGAATTCCTCGTTTTGCTGGTAAACCAAATGATGAAGTGGCAGCAATCAAAATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGGGCATTGCGGGCTTTAAGGGGACTGGTCAGGCTGAAATTATTGATGGAAGGGTCGGTTGTAAAACGCCAAGCCACAAGTACCCTCCGATCTATGCAGACATTGTCTCGCTTGCAGTCTCAGATTCGTTCCAGGAGGATCAGAATGCTGGAGGAGAATCAGGCTCTGCAGAGACAGCTCTTACAGAAGCATGCGAGAGAGCTTGAGAGTTTGCGGATGGGAGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAAGCCAAGTTACTAAGCAAGTATGAGGCTGCTATGAGGAGAGAAAGAGCATTGGCTTATGCATTCACTCATCAGCAAAACTGGAAGAACTCATCTAGATCTTTAAATCCTATGTTCATGGATCCAACAAATCCTGCCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCCGGCCATTGGAGAAAGAGTTGAATGATCATGGATCAGTGAAAAGCTCAAGCCGCAGCATTACTGGTGGAGAAATCAGCAAGTCATTTGCTCGTTTCCAGCTCAATTCTGAAAAGCACTCTCCAACAGCCAGCCAAAATCCTGGCTCACCAAGCTTTCAGTCCACTCCTTCCAAGCGAGTTTCGGCATCTGCTAAGAAATCAAAGAAGGCAAGTCCAAGGGGCAGCTGGATTACAGACGAGGACTCTAAAAGCTTGGTGAGTGTCCAGTCAGATCGCTTCCGGAGGCACTCGATCGCAGGTTCATCGGTGAGAGACGACGAGAGCCTTGCTAGCTCTCCAGCCATTCCAAGCTACATGGTTCCAACTCAATCTGCAAAAGCCAAGTCCAGGACTCAAAGTCCATTAGCCCCAGAAAATGGAAAAACTGAGAAAGGATCCTTTGGCACTGCAAAGAAACGGCTATCTTTCCCAGCTTCACCTTCCAGGCCAAGGCGCCATTCAGGTCCACCAAAGGTAGAAATCAGCTTAAATTCCGAGTTATCTGTGGACAAGGTTGTGGACAGTTGA 1404 0.4658 MGRKGNWFSSVKKALSPDSKEKKDQKSSKSKKKWFGKQKLQTSVSYSEADKLPPAPSVPLPEEIKVTDIENEISHDHDHVVQVVTAVEAEVSVPPVQIETVRVEAARIPRFAGKPNDEVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGSVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELESLRMGEEWDDSLQSKEQIEAKLLSKYEAAMRRERALAYAFTHQQNWKNSSRSLNPMFMDPTNPAWGWSWLERWMAARPLEKELNDHGSVKSSSRSITGGEISKSFARFQLNSEKHSPTASQNPGSPSFQSTPSKRVSASAKKSKKASPRGSWITDEDSKSLVSVQSDRFRRHSIAGSSVRDDESLASSPAIPSYMVPTQSAKAKSRTQSPLAPENGKTEKGSFGTAKKRLSFPASPSRPRRHSGPPKVEISLNSELSVDKVVDS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02332 467 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Viun1g02332 467 MobiDBLite consensus disorder prediction 315 340 - -
Viun1g02332 467 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Viun1g02332 467 MobiDBLite consensus disorder prediction 394 418 - -
Viun1g02332 467 SMART iq_5 116 138 IPR000048 GO:0005515
Viun1g02332 467 MobiDBLite consensus disorder prediction 1 60 - -
Viun1g02332 467 PANTHER IQ-DOMAIN 5-RELATED 1 448 - -
Viun1g02332 467 Gene3D - 100 145 - -
Viun1g02332 467 MobiDBLite consensus disorder prediction 315 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02332 Viun-Chr1 33960844 33965084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02332 1 452 IQD Protein Family AT5G03040 55.319 2.94e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02332 - - gmx:100800080 701.434