Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02324 ATGGAGGCTACTTTACCCTTTCTCTCCTTTCTCACGGTTCTACTCTCATTCCCACTCCACTCACCTTTTTCTTCTGCTCAGATTATGCAAGGTTTTGTAAGTTTGAACTGTGGAGGTACAACAGAATTTACCGATGAAATTGGTCTTCAGTGGACTCCTGATGATAAGCTTACTTATGGACAAACAAGTACTATATCAGTTACAAATGAGACACGGAAGCAATACACGACACTTAGACATTTTCCTGCTGATTCGAGGAAATACTGTTACACACTTGATGTTGTGAGTAGGACGAGCATAGAAATGCGAGAGCTTATATTTCTGGCTTCAAGTCCTACAGTGAGTGTTTGCTTATCAAATGCAACAACCGGACAACCGTTCATCTCCACGCTTGAACTTCGCCAATTCAATGGTTCAGTTTATTATACTCAATTTGAGGAACACTTTTACCTTAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCTCCAATTAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCGGATTCTATAAAGAAAGCTAATTATCTTGTTGATGTTGCTGCTGGAACCCAAAAAATTTCTACAGTAGCACCAATTGATGTTAACAGAGATGAAATGCCACCAGTGAAAGTGATGCAGACAGCTGTAGTGGGTACTAATGGATCTCTAACTTACCGATTAAATTTGGATGGTTTTCCTGGTACCGGTTGGGCATTCACCTATTTTGCAGAGATTGAAGATCTGGGTCCCAATGAATCCAGAAAATTCAGGCTAGTTCTTCCAGGCCAGCCTGATGTTAGCAAGGCAGTTGTGAATATTGAAGAAAACGCTCAAGGGAAATATCGTCTTTATGAACCAGGATTTACCAACATATCCCTACCTTTTGTGCTCTCTTTTAGATTTGGAAAGACATATGATTCCTCTAGGGGACCTCTCCTAAATGCCATGGAGATAAACATGTATTTGGAGAAAAACGATGGTTCTCTAGATGGAGCAACCATCTCCAGTGTACTTTCGCACTACTCTGCAGCAGACTGGGCAAAAGAAGGTGGTGATCCATGTCTACCTGTTCCATGGTCATGGGTTCGATGTAACTCTGATCCACAACCAAGAATAGTCTCAATCTTGTTATCCAATAGAAACTTGACTGGCAATATTCCTTTGGACATCACCAAATTGGTTGGTTTGGTTGAACTATGGCTTGATGGAAATATGTTGACTGGTCCATTACCTGATTTTATTGGTTGCATGGACTTAAAGATCATTCATCTAGAAAACAATCAATTGACCGGTGTGCTCCCAACTTCTTTAGTGAACCTTCCAAACTTGAGGGAACTGTATGTGCAAAATAACATGTTATCTGGAACAATACCATCAGATCTTCTTAGTAAGGATTTGGTTTTGAACTATTCTGGAAACCTCAATCTTCACAAAGAAAGCAAAATAAAGGGGCATATGTACGTTATTATTGGTTCATCAGTTGGGGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTGCTTGTATATGCGCAAAGGCAAGAGAAAATATTATCAGAAAGACCGAGTTGATTCTCTCCCTGCTCAAAGACTGGCTTCTTGGAAGAACGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAATGCTACCAATAACTTTGAGAAAAAAATTGGTGCTGGTGGTTTTGGAGTTGTCTACTATGGGAAGCTAAAAGATGGAAACGAGATAGCCGTTAAAGTTTTAACCAGTAATTCCTATCAAGGCAAGCGAGAGTTCTCAAATGAGGTAACTCTTCTTTCAAGAATACATCATAGAAATTTGGTACAGCTGCTTGGTTATTGCCGAGATGAAGAGAATAGTATGCTTGTCTATGAGTTCATGCATAATGGCACTCTCAAAGAACATCTTTATGGTCCATTAGCCAATGGAAGAAGTATTAATTGGATTAAGCGTCTTGAGATTGCTGAAGATGCTGCCAAAGGGATTGAATATCTTCATACGGGTTGTGTTCCTGTCGTTATCCATAGAGACTTAAAAAGCAGCAATATTCTTTTGGACAAGCACATGAAAGCCAAGGTTTCTGATTTCGGTCTTTCAAAACTTGCTGTTGATGGAGTCTCACATGTTTCAAGCATAGTTCGAGGAACAGTAGGATATCTGGATCCTGAGTACTATATTTCCCAACAGCTGACAGACAAGAGTGATGTTTATAGTTTTGGTGTAATTCTCCTTGAACTAATGTCTGGTCAAGAAGCAATATCAAATGAAAGCTTTGGTATAAATTGTCGAAACATAGTCCAATGGGCAAAGTTACACATTGAGAGTGGAGACATACAAGGTATTATCGATCCTCTGTTGCACAATGAATATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAGCCTCATGGACATATGCGACCATCAATTTCAGAAGTTCTAAAGGAGATCCAAGATGCCATATCTATTGAAAAACAGGCAGAAGCATTAAGAGAAGGGAACTCAGATGATATGTCCAAAAATTCTTTTCAGTCTTCCATGAACATGGGTTCTATGGATCTAGTTGGACCTGAGAGTTTCCTGTCAATTGATGAATCAGTTGCACAGCCAACTGCAAGATAG 2673 0.3962 MEATLPFLSFLTVLLSFPLHSPFSSAQIMQGFVSLNCGGTTEFTDEIGLQWTPDDKLTYGQTSTISVTNETRKQYTTLRHFPADSRKYCYTLDVVSRTSIEMRELIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTQFEEHFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSIKKANYLVDVAAGTQKISTVAPIDVNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFTYFAEIEDLGPNESRKFRLVLPGQPDVSKAVVNIEENAQGKYRLYEPGFTNISLPFVLSFRFGKTYDSSRGPLLNAMEINMYLEKNDGSLDGATISSVLSHYSAADWAKEGGDPCLPVPWSWVRCNSDPQPRIVSILLSNRNLTGNIPLDITKLVGLVELWLDGNMLTGPLPDFIGCMDLKIIHLENNQLTGVLPTSLVNLPNLRELYVQNNMLSGTIPSDLLSKDLVLNYSGNLNLHKESKIKGHMYVIIGSSVGASVLLLATVISCLYMRKGKRKYYQKDRVDSLPAQRLASWKNDDPAEAAHCFSFSEIENATNNFEKKIGAGGFGVVYYGKLKDGNEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCRDEENSMLVYEFMHNGTLKEHLYGPLANGRSINWIKRLEIAEDAAKGIEYLHTGCVPVVIHRDLKSSNILLDKHMKAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELMSGQEAISNESFGINCRNIVQWAKLHIESGDIQGIIDPLLHNEYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIEKQAEALREGNSDDMSKNSFQSSMNMGSMDLVGPESFLSIDESVAQPTAR 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02324 890 SUPERFAMILY Protein kinase-like (PK-like) 548 832 IPR011009 -
Viun1g02324 890 SUPERFAMILY L domain-like 363 479 - -
Viun1g02324 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 684 696 IPR008271 GO:0004672|GO:0006468
Viun1g02324 890 FunFam Leucine-rich repeat receptor-like protein kinase 540 637 - -
Viun1g02324 890 Pfam Leucine rich repeat 419 459 IPR001611 GO:0005515
Viun1g02324 890 SMART serkin_6 562 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02324 890 ProSiteProfiles Protein kinase domain profile. 562 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02324 890 ProSitePatterns Protein kinases ATP-binding region signature. 568 590 IPR017441 GO:0005524
Viun1g02324 890 Pfam Protein tyrosine and serine/threonine kinase 564 764 IPR001245 GO:0004672|GO:0006468
Viun1g02324 890 Gene3D Phosphorylase Kinase; domain 1 538 637 - -
Viun1g02324 890 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 638 847 - -
Viun1g02324 890 FunFam Leucine-rich repeat protein kinase family protein 337 489 - -
Viun1g02324 890 Gene3D Transferase(Phosphotransferase) domain 1 638 862 - -
Viun1g02324 890 CDD STKc_IRAK 568 835 - -
Viun1g02324 890 Gene3D Ribonuclease Inhibitor 338 494 IPR032675 -
Viun1g02324 890 PANTHER OS07G0107800 PROTEIN-RELATED 425 838 - -
Viun1g02324 890 Pfam Malectin-like domain 35 97 IPR024788 -
Viun1g02324 890 Pfam Malectin-like domain 101 324 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02324 Viun-Chr1 33910891 33917157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02324 24 672 Receptor kinase-like Gene Family AT2G37050 64.655 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun1g02324 PK_Tyr_Ser-Thr 9.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02324 - - gmx:100808740 1644.02