Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02313 ATGGATATTAAGGAAGCAGAAAGGGTGGTGATTGCAAAACCTGTTGCTTCAAGACCTACTTGTTCTACTTTCAAATCTTTCTCAGAGCTCTTAGCTGGTGCAATCAATGTTTCTCCTGATATTGCATCTTCTCAAGCTACAGTTTCTGCCATTAGACCCAAGACTGTGAGGTTCAAGCCTGCAGCATTGAATCACCCCCATGCAGGGTTTGATTCTTCTCAGGCTGATACTTTTGGAGCTGACAAGATTCCAAAACTCGACAACAATCAGTCCCTCATATACAAACCAACGGCAAAACTTGTGTCAAAGACAACCGTGTCTCTTTTGGCAAATATGGGAAATTGCAGCACTGGTCAGCAGCAAACACGGCAATTGATGGAGGCCAATTTTCAACATTCGATCAATGAAAAGTTTAGAAGCAACATGAGTTCACATCTTGATCAGAGTATTGCCCCGCATGCAGAAATAAACGAGATCAGTGAAGCTACTAAGATGGTGCAGCAGAACACAGAGGAAGACCAGAAGACTTTAACATCCTCAGCGAATTGTGATCGACCTTCTTATGATGGATACAACTGGAGAAAATATGGTCAGAAGCAAGTGAAAGGGAGTGAGTACCCGAGAAGTTATTACAAGTGCACACATCCTAATTGTCCAGTGAAGAAGAAGGTTGAAAGGTCATTTGATGGGCAGATTGCAGAAATTGTTTACAAAGGTGAACACAACCATTCGAAGCCACAGCTTCCTAAACGAAACACTGCAACAGGGACACAAGGTTCGGGGGTGTTGTCTGATGGAATGGTTCAAGATATGTGGAGTAATAGTCTGAGCGAGAGGAATGAAGGCAATGAAAGTAGAGTTGAGAACACAGGAGGAGGATTGTCTGTGCTTTCAGATTATTATGTCAAAGTTCCACAGCTTAATGATTCTGGTCTGAATATTGGTGCAACTAATGCTGGTGGAGGAAGCACAGAAAACTCCTGCGGTCTAAGTGGGGAATGTGAGGAAGGAAGCAAGGGGTTTGAGGCACAGGAAGATGAACCCAGAAGTAAAAGAAGGAAAAATGAGAATCTATCTAATGAAGTAGCACTATCAGAGGAAGGTTTAGTAGAGCCGCGGATTGTGATGCAAAGTTTCACTGATTCTGAAATACTTGGAGATGGATTTCGCTGGAGGAAATACGGGCAGAAGGTGGTGAAGGGCAATCCATATCCGAGAAGCTACTATAGATGTACTAATGTAAAGTGCAACGTTCGCAAACACGTGGAGAGAGCAATAGATGACCCGAGATCATTTGTGACCACATATGAAGGAAAACACAATCATGAAATGCCTCTGAAGAACACAGGAAATGTGGCCTCTGAAAGAGACTCACAGGCTTCTCTTTGTAAAGATAAAGCATGA 1404 0.4295 MDIKEAERVVIAKPVASRPTCSTFKSFSELLAGAINVSPDIASSQATVSAIRPKTVRFKPAALNHPHAGFDSSQADTFGADKIPKLDNNQSLIYKPTAKLVSKTTVSLLANMGNCSTGQQQTRQLMEANFQHSINEKFRSNMSSHLDQSIAPHAEINEISEATKMVQQNTEEDQKTLTSSANCDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQLPKRNTATGTQGSGVLSDGMVQDMWSNSLSERNEGNESRVENTGGGLSVLSDYYVKVPQLNDSGLNIGATNAGGGSTENSCGLSGECEEGSKGFEAQEDEPRSKRRKNENLSNEVALSEEGLVEPRIVMQSFTDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNVKCNVRKHVERAIDDPRSFVTTYEGKHNHEMPLKNTGNVASERDSQASLCKDKA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02313 467 ProSiteProfiles WRKY domain profile. 189 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02313 467 SUPERFAMILY WRKY DNA-binding domain 378 445 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02313 467 Pfam WRKY DNA -binding domain 189 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02313 467 Pfam WRKY DNA -binding domain 387 443 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02313 467 FunFam WRKY transcription factor 57 371 445 - -
Viun1g02313 467 SMART WRKY_cls 187 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02313 467 SMART WRKY_cls 385 444 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02313 467 MobiDBLite consensus disorder prediction 441 467 - -
Viun1g02313 467 FunFam WRKY transcription factor 172 247 - -
Viun1g02313 467 SUPERFAMILY WRKY DNA-binding domain 186 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02313 467 MobiDBLite consensus disorder prediction 239 265 - -
Viun1g02313 467 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 135 451 IPR044810 GO:0003700
Viun1g02313 467 MobiDBLite consensus disorder prediction 318 359 - -
Viun1g02313 467 Gene3D WRKY domain 172 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02313 467 Gene3D WRKY domain 371 446 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02313 467 ProSiteProfiles WRKY domain profile. 380 445 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02313 467 MobiDBLite consensus disorder prediction 338 359 - -
Viun1g02313 467 MobiDBLite consensus disorder prediction 248 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02313 Viun-Chr1 33832611 33838783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02313 87 446 WRKY Transcription Factor Family AT2G37260 45.526 1.51e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun1g02313 WRKY 6.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02313 - - vra:106757963 899.042