Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02312 ATGGATATTAAGGAAGCAGAAAGGGTGGTGATTGCAAAACCTGTTGCTTCAAGACCTACTTGTTCTACTTTCAAATCTTTCTCAGAGCTCTTAGCTGGTGCAATCAATGTTTCTCCTGATATTGCATCTTCTCAAGCTACAGTTTCTGCCATTAGACCCAAGACTGTGAGGTTCAAGCCTGCAGCATTGAATCACCCCCATGCAGGGTTTGATTCTTCTCAGGCTGATACTTTTGGAGCTGACAAGATTCCAAAACTCGACAACAATCAGTCCCTCATATACAAACCAACGGCAAAACTTGTGTCAAAGACAACCGTGTCTCTTTTGGCAAATATGAAGGGAAATTGCAGCACTGGTCAGCAGCAAACACGGCAATTGATGGAGGCCAATTTTCAACATTCGATCAATGAAAAGTTTAGAAGCAACATGAGTTCACATCTTGATCAGAGTATTGCCCCGCATGCAGAAATAAACGAGATCAGTGAAGCTACTAAGATGGTGCAGCAGAACACAGAGGAAGACCAGAAGACTTTAACATCCTCAGCGAATTGTGATCGACCTTCTTATGATGGATACAACTGGAGAAAATATGGTCAGAAGCAAGTGAAAGGGAGTGAGTACCCGAGAAGTTATTACAAGTGCACACATCCTAATTGTCCAGTGAAGAAGAAGGTTGAAAGGTCATTTGATGGGCAGATTGCAGAAATTGTTTACAAAGGTGAACACAACCATTCGAAGCCACAGCTTCCTAAACGAAACACTGCAACAGGGACACAAGGTTCGGGGGTGTTGTCTGATGGAATGGTTCAAGATATGTGGAGTAATAGTCTGAGCGAGAGGAATGAAGGCAATGAAAGTAGAGTTGAGAACACAGGAGGAGGATTGTCTGTGCTTTCAGATTATTATGTCAAAGTTCCACAGCTTAATGATTCTGGTCTGAATATTGGTGCAACTAATGCTGGTGGAGGAAGCACAGAAAACTCCTGCGGTCTAAGTGGGGAATGTGAGGAAGGAAGCAAGGGGTTTGAGGCACAGGAAGATGAACCCAGAAGTAAAAGAAGGAAAAATGAGAATCTATCTAATGAAGTAGCACTATCAGAGGAAGGTTTAGTAGAGCCGCGGATTGTGATGCAAAGTTTCACTGATTCTGAAATACTTGGAGATGGATTTCGCTGGAGGAAATACGGGCAGAAGGTGGTGAAGGGCAATCCATATCCGAGAAGCTACTATAGATGTACTAATGTAAAGTGCAACGTTCGCAAACACGTGGAGAGAGCAATAGATGACCCGAGATCATTTGTGACCACATATGAAGGAAAACACAATCATGAAATGCCTCTGAAGAACACAGGAAATGTGGCCTCTGAAAGAGACTCACAGGCTTCTCTTTGTAAAGATAAAGCATGA 1407 0.4293 MDIKEAERVVIAKPVASRPTCSTFKSFSELLAGAINVSPDIASSQATVSAIRPKTVRFKPAALNHPHAGFDSSQADTFGADKIPKLDNNQSLIYKPTAKLVSKTTVSLLANMKGNCSTGQQQTRQLMEANFQHSINEKFRSNMSSHLDQSIAPHAEINEISEATKMVQQNTEEDQKTLTSSANCDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQLPKRNTATGTQGSGVLSDGMVQDMWSNSLSERNEGNESRVENTGGGLSVLSDYYVKVPQLNDSGLNIGATNAGGGSTENSCGLSGECEEGSKGFEAQEDEPRSKRRKNENLSNEVALSEEGLVEPRIVMQSFTDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNVKCNVRKHVERAIDDPRSFVTTYEGKHNHEMPLKNTGNVASERDSQASLCKDKA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02312 468 ProSiteProfiles WRKY domain profile. 381 446 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02312 468 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 136 452 IPR044810 GO:0003700
Viun1g02312 468 MobiDBLite consensus disorder prediction 319 360 - -
Viun1g02312 468 Pfam WRKY DNA -binding domain 190 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02312 468 Pfam WRKY DNA -binding domain 388 444 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02312 468 SUPERFAMILY WRKY DNA-binding domain 187 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02312 468 MobiDBLite consensus disorder prediction 339 360 - -
Viun1g02312 468 SUPERFAMILY WRKY DNA-binding domain 379 446 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02312 468 FunFam WRKY transcription factor 57 372 446 - -
Viun1g02312 468 SMART WRKY_cls 386 445 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02312 468 SMART WRKY_cls 188 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02312 468 MobiDBLite consensus disorder prediction 240 266 - -
Viun1g02312 468 ProSiteProfiles WRKY domain profile. 190 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02312 468 FunFam WRKY transcription factor 173 248 - -
Viun1g02312 468 MobiDBLite consensus disorder prediction 249 266 - -
Viun1g02312 468 Gene3D WRKY domain 173 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02312 468 Gene3D WRKY domain 372 447 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02312 468 MobiDBLite consensus disorder prediction 442 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02312 Viun-Chr1 33832611 33838784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02312 87 447 WRKY Transcription Factor Family AT2G37260 45.526 9.55e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun1g02312 WRKY 6.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02312 - - vra:106757963 905.59