Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02308 ATGGCAAATGCCGGCGTGCAAAAAGCTCGTATTCCTCCCCTAACTTCCACCTCCAAGCCACCTCCTCTTTTCGACGGAACTACCAGGTTGTACATCAGTTATCTTTGTCCCTATGCTCAGCGTGTTTGGATCACTCGGGACTACAAGGGACTACAGGACAAGATCGAGCTGGTTCCTTTTGATCTTCCAAACAGGCCTGCCTGGTATAAGGAGAAAGTCTACCCAGAAAACAAGGTGCCATCATTGGAGCACAATGGGAAGGTCTTGGGAGAAAGTCTCTATTTGATGAAATACATAGACGACAACTTCGAAGGTCCATCACTTATTCCCAGTGATCCTGCCAAGAAAGAATTTGGTGAGCAGTTGATTTCTTATGTTGATACTTTCTCCAAAGAGCTGTATTCATTGAAAGCAGATCCAATACAACAAGCCAGTCCTGCTTTTGATTACTTGGAGAGTTCTCTTGGTAAATTTGATGATGGTCCATTCTTTCTTGGTCAATTTAGCTGGGTGGATATTGCCTATGTTCCGTTTGTTGAAAGATTCCAGCTTGTCCTTTTTGAGTTGTTCAAACATGACATAACTGAAGGAAGACCTAAACTTGCAGCATGGATTGAGGAAGTAAACAAGATTGATGTGTATACACAAACAAGAGGTGATCCAAAGGAGATTCTTGATCTTTTCAAGAAACGGTTATTGGAAAGTGAAGGATTGGAGAAGAAGTGA 726 0.4242 MANAGVQKARIPPLTSTSKPPPLFDGTTRLYISYLCPYAQRVWITRDYKGLQDKIELVPFDLPNRPAWYKEKVYPENKVPSLEHNGKVLGESLYLMKYIDDNFEGPSLIPSDPAKKEFGEQLISYVDTFSKELYSLKADPIQQASPAFDYLESSLGKFDDGPFFLGQFSWVDIAYVPFVERFQLVLFELFKHDITEGRPKLAAWIEEVNKIDVYTQTRGDPKEILDLFKKRLLESEGLEKK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02308 241 FunFam Lambda class glutathione S-transferase 105 235 - -
Viun1g02308 241 Gene3D - 105 235 - -
Viun1g02308 241 MobiDBLite consensus disorder prediction 1 20 - -
Viun1g02308 241 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Viun1g02308 241 CDD GST_C_Lambda 112 229 - -
Viun1g02308 241 Pfam Glutathione S-transferase, C-terminal domain 142 206 - -
Viun1g02308 241 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 232 IPR044629 GO:0004364
Viun1g02308 241 SUPERFAMILY Thioredoxin-like 18 108 IPR036249 -
Viun1g02308 241 SFLD Main (cytGST) 29 209 - -
Viun1g02308 241 SUPERFAMILY GST C-terminal domain-like 101 231 IPR036282 -
Viun1g02308 241 SFLD Glutathione Transferase (cytosolic) 29 209 IPR040079 -
Viun1g02308 241 Gene3D Glutaredoxin 1 104 - -
Viun1g02308 241 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Viun1g02308 241 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02308 Viun-Chr1 33819024 33822272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02308 10 233 Glutathione S-transferase Gene Family AT5G02790 69.333 5.81e-116 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02308 K00799 - gmx:100793025 412.535