Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02307 ATGGCAAATGCGTTCTGTTACTCTTCTTCGTCATTCAGCGGCGTGCAAAAAGCTCGTATTCCTCCCCTAACTTCCACCTCCAAGCCACCTCCTCTTTTCGACGGAACTACCAGGTTGTACATCAGTTATCTTTGTCCCTATGCTCAGCGTGTTTGGATCACTCGGGACTACAAGGGACTACAGGACAAGATCGAGCTGGTTCCTTTTGATCTTCCAAACAGGCCTGCCTGGTATAAGGAGAAAGTCTACCCAGAAAACAAGGTGCCATCATTGGAGCACAATGGGAAGGTCTTGGGAGAAAGTCTCTATTTGATGAAATACATAGACGACAACTTCGAAGGTCCATCACTTATTCCCAGTGATCCTGCCAAGAAAGAATTTGGTGAGCAGTTGATTTCTTATGTTGATACTTTCTCCAAAGAGCTGTATTCATTGAAAGCAGATCCAATACAACAAGCCAGTCCTGCTTTTGATTACTTGGAGAGTTCTCTTGGTAAATTTGATGATGGTCCATTCTTTCTTGGTCAATTTAGCTGGGTGGATATTGCCTATGTTCCGTTTGTTGAAAGATTCCAGCTTGTCCTTTTTGAGTTGTTCAAACATGACATAACTGAAGGAAGACCTAAACTTGCAGCATGGATTGAGGAAGTAAACAAGATTGATGTGTATACACAAACAAGAGGTGATCCAAAGGAGATTCTTGATCTTTTCAAGAAACGGTTATTGGCTCAACAGTAA 738 0.4241 MANAFCYSSSSFSGVQKARIPPLTSTSKPPPLFDGTTRLYISYLCPYAQRVWITRDYKGLQDKIELVPFDLPNRPAWYKEKVYPENKVPSLEHNGKVLGESLYLMKYIDDNFEGPSLIPSDPAKKEFGEQLISYVDTFSKELYSLKADPIQQASPAFDYLESSLGKFDDGPFFLGQFSWVDIAYVPFVERFQLVLFELFKHDITEGRPKLAAWIEEVNKIDVYTQTRGDPKEILDLFKKRLLAQQ 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02307 245 CDD GST_C_Lambda 121 238 - -
Viun1g02307 245 SUPERFAMILY GST C-terminal domain-like 110 240 IPR036282 -
Viun1g02307 245 Gene3D Glutaredoxin 11 113 - -
Viun1g02307 245 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 35 116 IPR004045 -
Viun1g02307 245 Pfam Glutathione S-transferase, C-terminal domain 151 215 - -
Viun1g02307 245 SUPERFAMILY Thioredoxin-like 27 117 IPR036249 -
Viun1g02307 245 PANTHER GLUTATHIONE S-TRANSFERASE L1 15 241 IPR044629 GO:0004364
Viun1g02307 245 SFLD Glutathione Transferase (cytosolic) 38 218 IPR040079 -
Viun1g02307 245 Gene3D - 114 245 - -
Viun1g02307 245 Pfam Glutathione S-transferase, N-terminal domain 39 115 IPR004045 -
Viun1g02307 245 SFLD Main (cytGST) 38 218 - -
Viun1g02307 245 FunFam Lambda class glutathione S-transferase 114 244 - -
Viun1g02307 245 FunFam Glutathione S-transferase L2, chloroplastic 10 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02307 Viun-Chr1 33819017 33822280 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02307 19 242 Glutathione S-transferase Gene Family AT5G02790 69.333 3.97e-116 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02307 K00799 - gmx:100793025 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02307 1 33819017 33822280 Viun7g01025 7 10697369 10699910 PCT