Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02280 ATGAGAAAGCTGTGTTTTAACCCCAAGACGCCGTCGTTTGCCATGGCCCGCAATTCTCCTTCTTCACCACTATCTTTAATCTCAAGCCCTACACCGCCCAGGCTCAGTTTTTCCGAACCTAGCAGCGTCGTCGACGAAGACAGCTTCATGGAGGAAGCAGAGGCGCTCATACTCAAATGGAACCCTGACTCCTCAGCCTATGCCAGAGTCACTTCTCTGTTTTACGAAGACAAAATCGAAGCCAAACACTATATTCACTGCGTTAACCAGCTTCACCAAACCATGCATTCCTTGATCTCTCACAACCCTTCCTCCCATAAACTCATCCTCGCTCACAACCTAATGCAGATCGCCATGAAGAGACTCAAGAAAGAGTTCTACCAGATCTTATCCATGAACCGCGCTCACCTTGACCCCGAATCAGTCTCCGCCAGATCCTCTCGCACCTCCGCTAATTCCAGCTCCTCCGATTGCGACGACGACTTCGCGGCGGAAGACGATGATATCCGTGCCGCCGGCGACTCTATCACCGAAGTCGAGCAGGTTTCCTCGGGCGCCATGGCGGATCTGAAATTAATCGCCGACTGCATGGTCTCTTCCGGCTACGCGAAGGAGTGCGTCAGCGTTTACATCATCATCCGAAAATCCATAATCGACGAAGGAATCTATCGCCTCGGCGTTGAGAAACTGAGCTCCACGCGCGCTAACAAGATGGATTGGGAAGTGCTTGATTTGAAAATCAAGAGCTGGTTGGAGGCAGTGAGGATTGCCGTTAGAACGCTGTTTAACGGGGAGAGAATCCTCTGCGACAACGTCTTCAGTTATTCAGATTCCGTAAGAGAATCCTGCTTCGCCGAAATTTCCAGAGACGGCGCCTCTCTCCTTTTCGGATTCCCCGAACTCGTCGCCAAAACAAAGAAATCGTCGCCGGAGAAGCTGTTCCGCGTGCTCGACATGCATGCTGTGGCCTCAGATCTGTTGCCGGAGATCGAGTCCATATTTTCCTCCGATTACAACTCCGCCGTGCGTTCTCAGTTCCTCACTTCACTTCAACGACTCACCGAGTCTGCGCAATTCTTGCTCTCTGAGTTCGAGTCCACGATCCAAAAAGACTCTTGCAAGCCTGCGGTGAACGGCGGCGGCGTGCACTCGCTCACGATTCAGACAATGAATTATCTCGCAATCCTCGCAGATTACGTTAACGTTCTCTCTGACATATTCCCGCGCGACTGGCTTCCTCTGCCGAAGTCTTCGTCGCTGCCGGAGTCTTATTTATACAGTCCGGAGTCTGATTACTCTGCGTCGACGCCGGCGCTGACGGTGCGCATGGCATGGCTGATTCTCGTCCTCCTTTGCAAGCTCGACGGCAAAGCGAAGCATTGCAAGGACGTTTCACTATCTTACTTGTTTCTCGCGAACAATCTCTGGTACGTGGTGGCCAGAGTCCGAAGCTCGAACCTGCAGTACGTGCTTGGCGACGATTGGATTACGAAGCACGAAGCTAAAGCGAAGAGGTTCGTGGCGAACTACGAGAAGATGGCTTGGGGAGAAGTGGTTTCATCGCTGCCGCAAAATCCGGGCGCAGCGGAGGCGAGGGCGGTGTTCGAGAACTTCAACCTGAAATTCGAGGAAGCCTATCGGAAGCAGAACTCGTTTGTGGTAGCTGATAGAGAACTACGAGACGAAATAAAAGGTTCGATCGCGAGAAGTATTGTGCCGAGATATCGCGAGTGGTATAATGCGCTGCTTGCTTCGGTGGGATCAGTGAGGGACTTGACGGTGAGGGAGATTGTGACGTTTACCCCACAAGACATTGAAAATTACCTTGCTAACCTCTTCCTTTTTGGAACGTCATCCAGTTCTGTATCGTCCTCTTCGGTAACTTCGTCTCCTCTCCGGCGTTGGAGTTGA 1911 0.5196 MRKLCFNPKTPSFAMARNSPSSPLSLISSPTPPRLSFSEPSSVVDEDSFMEEAEALILKWNPDSSAYARVTSLFYEDKIEAKHYIHCVNQLHQTMHSLISHNPSSHKLILAHNLMQIAMKRLKKEFYQILSMNRAHLDPESVSARSSRTSANSSSSDCDDDFAAEDDDIRAAGDSITEVEQVSSGAMADLKLIADCMVSSGYAKECVSVYIIIRKSIIDEGIYRLGVEKLSSTRANKMDWEVLDLKIKSWLEAVRIAVRTLFNGERILCDNVFSYSDSVRESCFAEISRDGASLLFGFPELVAKTKKSSPEKLFRVLDMHAVASDLLPEIESIFSSDYNSAVRSQFLTSLQRLTESAQFLLSEFESTIQKDSCKPAVNGGGVHSLTIQTMNYLAILADYVNVLSDIFPRDWLPLPKSSSLPESYLYSPESDYSASTPALTVRMAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLGDDWITKHEAKAKRFVANYEKMAWGEVVSSLPQNPGAAEARAVFENFNLKFEEAYRKQNSFVVADRELRDEIKGSIARSIVPRYREWYNALLASVGSVRDLTVREIVTFTPQDIENYLANLFLFGTSSSSVSSSSVTSSPLRRWS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02280 636 Gene3D Exocyst complex component Exo70 70 621 - -
Viun1g02280 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 41 613 IPR004140 GO:0000145|GO:0006887
Viun1g02280 636 MobiDBLite consensus disorder prediction 141 158 - -
Viun1g02280 636 MobiDBLite consensus disorder prediction 16 39 - -
Viun1g02280 636 Pfam Exo70 exocyst complex subunit 248 610 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun1g02280 636 MobiDBLite consensus disorder prediction 141 161 - -
Viun1g02280 636 SUPERFAMILY Cullin repeat-like 47 613 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02280 Viun-Chr1 33662731 33665196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02280 50 613 EXO70 exocyst subunit family AT3G09520 54.609 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02280 K07195 - gmx:100810548 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02280 1 33662731 33665196 Viun7g00694 7 5753905 5767698 PCT
Viun7g01114 7 12125582 12128036 Viun1g02280 1 33662731 33665196 PCT