Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02278 ATGCAGAGACCTAAAGGAAGCAAGCAGGTTCATAGACGTAGAAAACTTCAGAGATTTTCCTCTGATTCTGGTTCTTGCAGTGATGGGGTTGCAGATGGAGATTCAGGTTCGTTTCAATTGGGGTTCGGGTCCTCAAAGCAACCGTTTGGAACTCCCATGAAGAAGCTATTAGCTGAAGAACTGTCCCGAGAAACTGAACCCAAAAGAAGAGCTCCCGGTGTCATAGGCAGATTAATGGGTCTTGATGGACTTCCGTTGCAATTGCCTGCCAATAAGCATCACAAGCATCTGTCAGAAAATCATGTGAAAGGAACAACACCGGCAGCGAAAACTCGAAGAAGTGGTAAATTATACGGCGGTCGAACGTCTGGAAGAAGTTCAAAGAATCAGCAAGAGTTTAAGGATGTGTTTGAGGTCTCAGAGATCTCAAACATAGAGAACTGTAGGTATTCTTCCCAGGGGTCTGTAAAGTTGAAGATCACTGATGATGAAATGTCATTTGTTGAACAGAAATTCATGGATGCCAAACTCCGTGCAACTTATCAAGATTTACCGTCTTCCCAGGATTCCCATGATACACTCGAGATTTCTAATAATGATCTTTTGCAAAAATACTTTAAGCGGCCAGATTATTTGTTTAAAAGTCATCTAGATGATCTGCAAGGTTCCCCTTCTGAATCACATTTTGATCACATCAGAGTTACCAAATCATCAGATATAGAGAACTATGAACATGGTGACTTAAGCCCGCCGGGCAGGGAGATAAAAGGGTTGAATTACAGTAGATCTCATCAGAAGCATCGTGATGGTTATTCTTCCCATGTAATCAGAAGACAGGATATTCATAGTTCGCCAAAATCATCAGAGCTTCAGTTTAAGGGAAGAAATGAGCCTGATGCAGTCCCAACAAGGATTGTTATCCTAAAACCTAATCTTGGAAAAGTGCAGAAAGCTACCAAAATTGGTTCATCACCTTGTTCTTCACATACTTCTCTGTTGGATTATGGAAAGTATCCTAAATTTTCAGATAGCAGATTTAGGGACTCTGAACTGAATCAAAGGAAAAATTTGCCTGATAATGCCTGGCATTCAAGGCAAAATTCTTTGGAATCAAGAGAAATTGCAAAGGAAATCACAAGCCAAATGAAAAATAATTTGGGTAATGGCTCCATGTTATTATCAACTTCTAGATTTAGAGGAAATACGTGGGACAATAGCTCATGTAGTTTTTCTGGGAATGAATCTCTTGAGGAATCAGAGGTGACACCTGCAACTTTGGGAAAACCATTTTACGTAAGTAATACTATCAGCCCAGCATCATGTTTTAGTGAGTCATTTGTGACTAAAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGTCACTAAAGTCTCAGCAGGGTCATTCTGTATCCAGGAGTGGCACTCTAGCTGAAATGCTTGCGAAACCTGATAAGGAAATGAAAACAGCTAATTTTGACAGCAGCCCTAGTGGGGAAGGTTTACGTGATAAACTTTCTAACAACGGTAAACCTGCTGGATGGGTTGAACCATTGGGTATTAGCAGTAGGGATGGATGGAAGGATGGATGTATTGGAAGTTTACCAAGGTCTAAGTCTCTTCCTGCTTCATCTACTACTTCCTTCGGAAGTCCTAGAACAATTTTGCGCCATGAAGCTCTTCACGATGATCGATTTATGATCCCAAAGGTAGCCTATAAACGAGAAAGGAAGAAAGTGGTGAAGGGTCTTGATCGGAGACAGTGTATGAATACGAGAAACCTAAAAAGCAAGAAGTCTCGGTGTTCCGATCCATCAAATCTAGAAGGCAATGAGTCATCCCAAGACTTGAATACAATTCAAAATAAAGTGAGGTGTAATCTTGAAGAGGATTTGCCGAAGCAAGAAATGTTGGCCGCTGAGATCGACGGAGAAACTACTGCAGTTACTGAAGCTGTTGCAAATGTGGCAGATGAAAATGCAGTTGTTTCATCTGAATCTTATATTAAGGAGGTATCAGTTGGGTCTTCCGCTGAAAATTTTGTCCCCTTGCAAACACCTGTATCTGGACTTGAATCTTCATGCTGTAAAGATGCGGATCAACCCAGTCCAGTCTCAGTGCTGGAACCTTCTTTTACTGATGATCTGTCATCATGTTCCGATTGTTTTGAAAGTCTCAGTGTTGACATACAAGGGCTTCGAATGCAACTTCAGTTACTGAAGCTAGAATCTGAAGAATTTGTGGAAGGATCCGCGCTAATTCAAAGTGATGAAGATGGCGGGGAAGCATATTCAGGAATATCAGAAGACAATGGATTACTTAATGGAGATAGCTGGGAGTCCTCCTACATGATTGATGTCTTGTCTGAATCTGGTATTGATAGAGCTGTACCTGATGCATTTTTGGAAGTTTGGCATTCTCTTGAATGCCCTGTTAGTCTTTCAGTGTTTGATGAGCTTGAAAAAAAGTACTCTGATTGGAGTACTTGTCCACGGTCCGAAAGGAGATTGCTTTTTGATCGTATAAATTGGGGAATTATCGACATATACGAGCAATTCGTTAGTGCACAATCATGGGTAATCCCTTCGAGAGCCACAAATCTTTGTTCTAGTTCTAAATTGATTAAAAGTGGACTCCAAGACTGTTTGTACAGAATGCTGTGGAGTCAGGGAAAAGTAAAGGATACGACACTGGGGAAGGTGTTGGTAAGCGAATTGCAGTGGTTGAACTTAAGAGATGACATTGATGGAATAGTTAGCGAAGTTGAGAGCTTGCTACTTGATGATCTAGTGGCAGAGATAGCTGTTACATAG 2814 0.4104 MQRPKGSKQVHRRRKLQRFSSDSGSCSDGVADGDSGSFQLGFGSSKQPFGTPMKKLLAEELSRETEPKRRAPGVIGRLMGLDGLPLQLPANKHHKHLSENHVKGTTPAAKTRRSGKLYGGRTSGRSSKNQQEFKDVFEVSEISNIENCRYSSQGSVKLKITDDEMSFVEQKFMDAKLRATYQDLPSSQDSHDTLEISNNDLLQKYFKRPDYLFKSHLDDLQGSPSESHFDHIRVTKSSDIENYEHGDLSPPGREIKGLNYSRSHQKHRDGYSSHVIRRQDIHSSPKSSELQFKGRNEPDAVPTRIVILKPNLGKVQKATKIGSSPCSSHTSLLDYGKYPKFSDSRFRDSELNQRKNLPDNAWHSRQNSLESREIAKEITSQMKNNLGNGSMLLSTSRFRGNTWDNSSCSFSGNESLEESEVTPATLGKPFYVSNTISPASCFSESFVTKEAKKRLSERWKMSLKSQQGHSVSRSGTLAEMLAKPDKEMKTANFDSSPSGEGLRDKLSNNGKPAGWVEPLGISSRDGWKDGCIGSLPRSKSLPASSTTSFGSPRTILRHEALHDDRFMIPKVAYKRERKKVVKGLDRRQCMNTRNLKSKKSRCSDPSNLEGNESSQDLNTIQNKVRCNLEEDLPKQEMLAAEIDGETTAVTEAVANVADENAVVSSESYIKEVSVGSSAENFVPLQTPVSGLESSCCKDADQPSPVSVLEPSFTDDLSSCSDCFESLSVDIQGLRMQLQLLKLESEEFVEGSALIQSDEDGGEAYSGISEDNGLLNGDSWESSYMIDVLSESGIDRAVPDAFLEVWHSLECPVSLSVFDELEKKYSDWSTCPRSERRLLFDRINWGIIDIYEQFVSAQSWVIPSRATNLCSSSKLIKSGLQDCLYRMLWSQGKVKDTTLGKVLVSELQWLNLRDDIDGIVSEVESLLLDDLVAEIAVT 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02278 937 MobiDBLite consensus disorder prediction 1 15 - -
Viun1g02278 937 MobiDBLite consensus disorder prediction 57 71 - -
Viun1g02278 937 MobiDBLite consensus disorder prediction 592 616 - -
Viun1g02278 937 MobiDBLite consensus disorder prediction 262 296 - -
Viun1g02278 937 MobiDBLite consensus disorder prediction 1 73 - -
Viun1g02278 937 PANTHER AFADIN 7 935 - -
Viun1g02278 937 MobiDBLite consensus disorder prediction 262 284 - -
Viun1g02278 937 Pfam DUF761-associated sequence motif 65 85 IPR032795 -
Viun1g02278 937 MobiDBLite consensus disorder prediction 484 519 - -
Viun1g02278 937 Pfam Protein of unknown function (DUF3741) 169 210 IPR022212 -
Viun1g02278 937 MobiDBLite consensus disorder prediction 101 131 - -
Viun1g02278 937 Pfam Domain of unknown function (DUF4378) 781 933 IPR025486 -
Viun1g02278 937 MobiDBLite consensus disorder prediction 20 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02278 Viun-Chr1 33635827 33641445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02278 48 936 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 34.829 1.84e-121 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02278 - - pvu:PHAVU_001G171300g 1572.37