Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02267 ATGGCTTGTTATCAACAAAAACTGTTTAACAGACTGAAGCCACTCATAGGTGTAGTTTTCTTGCAGTTTGGATATTCTGGTATGGATGTTCTGTCCAAGGCTGCACTCAACAAGGGAATGAGTAACTATGTATTTGTTGTGTACCGTCATGTTTTTGCCTTTGTTGTCATGGCCCCTTTTGCAGTGTTCTTGGAGAAGAAAGTGAGGCCGAAGATGACGTTTTCAATCTTCATGAAGATAGTGATTCTCAGCTTGCTAGAGCCTGTTATTGACCAAAATTTGTATTTTTTGGGAATGAAGTACACCACAGCAACCTTTGCTGTTTCCATGTACAATGTTCTCCCTGCCATTACCTTCGTCATGGCTTGGATTCTTAGGCTTGAGAAGGTAAAATTAAAAAGCACACGGAGTCAAGCAAAGGTGGTGGGAACTTTAGCAACTGTTGCAGGTGCCATGATCATGACACTGATAAAGGGTCCAATACTTGATCTTTTTGGAACACACGCCAGCAATACAAACAACCTGCAAAATGGTGGGGTAAATCTTCAAAATGCAATAAAAGGATCAGTGATGATCACAATTGGCTGCTTTAGTTGCGCTTGTTTCATGATTCTCCAAGCTATTACCATTGAAGCCTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGTTTACTGGGATCTGTTGAAGGTGGTATAGTGGCATTGGTTATGGAAAGGAATAATTTTTCAGCTTGGTCTCTGCAATGGGATACAAAATTGCTGGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGTGGTGATGAAAGATAGAGGTCCTGTCTTTGTGACAACTTTTAACCCTCTATGCATGGTCATTGTGGCTATCATGGGCTCCTTCTTTCTGGCAGAACAAATGTACCTTGGAAGGGCAATTGGTGCTATCGTGATTATTGTAGGACTGTATCTGGTGGTGTGGGGTAAAAGCAAAGACTACGAGTCATCAAGTGCGATTACTGAAGAGAATGTGTTGTCAGCCAAGCAAACAGTAGAAAAGAGCAACAGCAAAGAAGAACATTTCAGTAACTTAGGTACCATAGCACGAGATGAACAAGTATGA 1122 0.418 MACYQQKLFNRLKPLIGVVFLQFGYSGMDVLSKAALNKGMSNYVFVVYRHVFAFVVMAPFAVFLEKKVRPKMTFSIFMKIVILSLLEPVIDQNLYFLGMKYTTATFAVSMYNVLPAITFVMAWILRLEKVKLKSTRSQAKVVGTLATVAGAMIMTLIKGPILDLFGTHASNTNNLQNGGVNLQNAIKGSVMITIGCFSCACFMILQAITIEAYPAELSLTAWICLLGSVEGGIVALVMERNNFSAWSLQWDTKLLAAVYSGIVCSGMAYYIQGVVMKDRGPVFVTTFNPLCMVIVAIMGSFFLAEQMYLGRAIGAIVIIVGLYLVVWGKSKDYESSSAITEENVLSAKQTVEKSNSKEEHFSNLGTIARDEQV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02267 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 331 - -
Viun1g02267 373 Pfam EamA-like transporter family 17 154 IPR000620 GO:0016020
Viun1g02267 373 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Viun1g02267 373 PANTHER WAT1-RELATED PROTEIN 14 337 IPR030184 GO:0016020|GO:0022857
Viun1g02267 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02267 Viun-Chr1 33543038 33546076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02267 5 363 Nodulin-like Gene Family AT2G37460 63.788 5.83e-171 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02267 - - vra:106757633 672.544