Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02256 ATGACATCTTTCCTAAAGCCTGAGAATGCTCTCAAAAGGGCCGAAGAGTTAATCAATGTTGGGCAGAAGCAGGATGCTCTACAGACTCTTCATGACCTCATTACCTCAAAGAGATACAGAGCATGGCAGAAGACACTTGAAAGGATTATGTTTAAGTATGTTGAACTTTGTGTTGACATGCGCAAGGGCCGATTTGCAAAAGATGGGCTTATTCAGTATAGGATAATATGTCAGCAAGTCAATGTTAGTTCACTGGAGGAGGTGATCAAACACTTTATGCACCTGTCAACTGAGAAAGCTGAACAAGCTCGGAGTCAAGCACAAGCGTTGGAAGAAGCCCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCAGAGGACTTGATGTTGAGTTATGTCAGTGGTGAGAAAGGGAAGGACAGATCTGATCGGGAGCTTGTTACCCCATGGTTTAAATTTCTCTGGGAAACTTACAGGACAGTGCTTGAATTATTGCGAAACAACTCAAAACTGGAAGCATTATACGCTATGACAGCTCATCGAGCTTTCCAGTTCTGCAAGCAATATAAACGAACAACAGAGTTCCGCAGACTGTGCGAAATCATAAGAAACCATTTGGCTAATCTCAACAAATACCGTGACCAACGAGACAGGCCTGACCTTTCAGCACCTGAAAGCTTACAATTGTATCTTGATACTAGAGTTGAGCAGCTGAAAATTGCCACTGAACTTGAACTCTGGCAGGAAGCCTTCAGATCAGTGGAGGATATACATGGACTGATGTGCTTGGTCAAGAAAACTCCCAAGCCATCCTTGATGGTTGTTTACTATGTGAAGCTGACAGAAATATTTTGGATATCGTCAAGTCATCTTTATCATGCATATGCATGGTTCAGGCTCTTTTTATTGCAAAAAAGCTTCAATAAGAACCTGAGTCAGAAGGATTTGCAATTAATAGCTTCATCTGTTGTTCTTGCTGCACTTTCAGTGCCTCCTCATGACCGTACACATGGTGCGTCTCACTTGGAACTGGAGCATGAAAAAGAGAGAAATTTGAGGATGGCCAATCTCATTGGCTTTAATCTTGAGACTAAACCTGAAAGCAGAGAAATGCTCTCAAGATCATCACTTCTTGCTGAACTGGCATCCAAGGGAGTGATGTCTTGTGTGACTCAGGAAGTGAAAGATGTTTACCATCTTTTGGAACATGAATTTCATCCCTCAGATCTTGCAGTAAAAGCGCTGCCCTTGATAACTAAAATCTCAAAGTTAGGAGGCAAGCTTTCTACAGCTTCTTCTGTTCCCGAAGTACAGTTGTCTCAATATGTCCCAGCATTGGAAAGACTAGCTACCATGAGGTTGCTGCAGCAGGTGTCCAACGTTTACCAGACAATGAAGATAGAGACTTTATCTGGGATGATCCCGTTCTTTGACTTTTCCGTAGTTGAAAAGATTGCCGTAGATGCTGTAAAGCAGAAGTTTGTATCAATGAAAGTTGATCACATGAAAAATGTTGTGATCTTTTGCAAAACGAGTCTCGAGTCAGATGGCTTAAGGGATCACTTGGCCAATTTTGCTGAACAATTAAATAAGGCCCGACAAATGATTTATCCTCCTGATAGGAAACCATCTAAACTTGGAGCTTTACTTCCAACTTTGACTGAGGTTGTTGCCAAAGAACACAAGAGGCTTCTTGCTCGAAAATCAATCATTGAGAAACGGAAAGAAGAACAAGAACGGCAGCTTCTTGAAATGGAACGAGAGGAGGAGTCAAAAAGACTAAGACTTCAGAAAATAACTGAAGAAGCAGAACAAAGACGGCTTGCCACCGAGTATGAGCAGAGGAAGAATCAGAGGATCCTTAGGGAGATAGAAGAGAGGGAAATTGAAGAAGCTCAAGCTTTACTTCAGGAAGCTGAAAAGCGTATCAAAAAGAAGGGGAAAAAGCCAATCATAGAGGGAGACAAAATCACCAAGCAGACCTTGATGGAGTTAACTTTGACTGAACAACTCCGGGAAAGACAGGAAATGGAAAAGAAGTTGCAGAAGTTAGCGAAAACAATGGATTATTTGGAAAGAGCGAAAAGAGAGGAAGCTGCTCCCCTTATTGAAGCTGCGTATCAACAACGTTTAGTGGAAGAGAGACTTCTTCATGAGCGTGAACAACAGCAAGAAGTTGAACTGAGCAAACAGAGGCATGAGGGAGATCTCAAGGAGAAGGAGAGGCTTGCTCGAATGATGGGCAATAAGGAGATATATGAGGTCCGAGTTGTTAGTCATCGCCAAGCAGAGTTTAATAGATTAAGAAGAGAACGGGAAGAGCGAATCTCTAGGATTTTGCAGTCAAGGAGACAGGAGAGGGAAAAAATGAGGAAGTTGAAGTATTATCTCAAATTAGAAGAAGAGAGACAACAAAAAATGCGTGAGGAGGAGGAAGCACGGAAACGTGAAGAGGCTGAAAGGAGAAAGAAGGAAGAGGCTGAACGCTTAGCAAAACTGGCGGAGATAGCTGAAAAACAGAGGCAGAGAGAGCGGGAACTTGAAGAAAAAGAGAGACAAAGGAGAGAAGCATTGTTAGGCAGAAGTGTTGAAGCAGCTCCTCCTGCGCGGCAATCGGAACCTGTAACAGCTCCTGCTGCAGCTGCAGCCGCTGCCGCTGCAGCTCCAAACCCAGGGAAATATGTGCCTAAGTTCATGCGAGATAGAGCTGAAAGAACAGGCACTGCTCCTCCTCCGGAAACAGACCGCTGGGGTGGTAACAGTAGCAGCAGGCCGGATGGTGACAGGTGGCGTGGTGGTGATGATCGGCGAAGTAGTTATGTTAGTGGTGGAGGTTCAAGGTCATCATCTTCTTGGTCCAGGAATCCGCGTTGA 2874 0.4377 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLELLRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRVEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLETKPESREMLSRSSLLAELASKGVMSCVTQEVKDVYHLLEHEFHPSDLAVKALPLITKISKLGGKLSTASSVPEVQLSQYVPALERLATMRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKIAVDAVKQKFVSMKVDHMKNVVIFCKTSLESDGLRDHLANFAEQLNKARQMIYPPDRKPSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEREIEEAQALLQEAEKRIKKKGKKPIIEGDKITKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERLLHEREQQQEVELSKQRHEGDLKEKERLARMMGNKEIYEVRVVSHRQAEFNRLRREREERISRILQSRRQEREKMRKLKYYLKLEEERQQKMREEEEARKREEAERRKKEEAERLAKLAEIAEKQRQRERELEEKERQRREALLGRSVEAAPPARQSEPVTAPAAAAAAAAAAPNPGKYVPKFMRDRAERTGTAPPPETDRWGGNSSSRPDGDRWRGGDDRRSSYVSGGGSRSSSSWSRNPR 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02256 957 Pfam PCI domain 373 508 IPR000717 -
Viun1g02256 957 Coils Coil 615 649 - -
Viun1g02256 957 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 949 IPR027512 GO:0005852
Viun1g02256 957 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 IPR000717 -
Viun1g02256 957 MobiDBLite consensus disorder prediction 804 859 - -
Viun1g02256 957 Gene3D - 269 342 - -
Viun1g02256 957 Gene3D - 352 510 - -
Viun1g02256 957 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Viun1g02256 957 Gene3D UVR domain 217 268 - -
Viun1g02256 957 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 931 IPR027512 GO:0005852
Viun1g02256 957 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Viun1g02256 957 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Viun1g02256 957 MobiDBLite consensus disorder prediction 941 957 - -
Viun1g02256 957 MobiDBLite consensus disorder prediction 804 957 - -
Viun1g02256 957 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Viun1g02256 957 Coils Coil 796 856 - -
Viun1g02256 957 Coils Coil 561 602 - -
Viun1g02256 957 Coils Coil 93 120 - -
Viun1g02256 957 Coils Coil 667 697 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02256 1 957 Eukaryotic Initiation Factors Gene Family AT4G11420 72.410 0.0 1338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02256 K03254 - gmx:100782598 1446.41