Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02246 ATGTCGCGTTTGCTGCATGGAACGCTCGATGTGACCATATACGAGGTGGATGCACTGCCAACTCTTAACGACTGCGATTTCAATCTCTGCTGCAAGGGTACAAATCGAAGCGTGAGGAAGAGATTCCTTTCCCAACTCAAGAGTTGTCTGTTCTGTCAATGCCAAGGCCAACCCGGGTCTACCCAAACGGGTCTGTATGCAACAGTTGATTTAGATAAGGCAAGAGTTGGAAGGACTAAAGTGGTAAATGATGAACCCTCCAACCCCACGTGGAATGATACCTTTCGGATATACTGTGCCCATTTGATCTCCCATGTTATATTCACTGTCAAACAAAAAGACCCCATTGATGCAACTCTAATTGGAAGAGCTTATGTCCCAGTTGAGCAAGTCGTCAAAGGTAACATAGTGGACACATGGGTCCCAATATTGGACGAGGATCGCAACCCCATTCCCAGTGACTCTAAAATCCATGTCAAAATGCAATTCTCTAATGTTTTGAATGACATAAACTGGTCTGGAGGAATAAGAAGTCCGAGGTTTCAAGGAGTTCCCCACACCTTCTTTAGTCAAAGAACCGGCTGCAACGTTACTTTGTACCAAGATGCTCATGTTTCACATGGTTTTCAACCGTGGATTCCCTTGTCGGGAAGGAATTATGAGTTTAGGAAATGCTGGGAGGATATTTACAGTGCCATTGTGGAGGCTAGGTACTTTATTTACATAACTGGTTGGTCTGTGTACACTGAAATAAGCTTGATTAGGGACCCCATGCAGCCCAAGAGAATCACCCTTGGGGAACTTCTCAAGAGGAAAGCTGAGGAAGGTGTTAAGGTTCTCATGCTTGTTTGGGATGATAGAACATCTGTGCCAGACTTCAAGAAAGATGGCTTGATGGCAACCCATGATCAAGAAACTGCTGCTTACTTCAAAAACACAAAGGTGAATTGTGTTTTGTGTCCGCGGAACCCGGATGTTGGAAGAAGCATTGTGCAGGATCTGGAAACTTCAACAATGTTCACTCATCACCAGAAGAGTGTAGTTGTTGATACCCAATTTGTTGGTGCTCCGGTGGGACAACGACAAAAGAGAACAATAACAAGTTTCATAGGTGGCATTGATCTTTGCGATGGGAGATACGATACTCAGGAACATCCTCTGTTTTCAACTTTGGACACACTGCATAAAGATGACTTCCATCAGCCAAATTTCCCAGGTGCTTCCATCAAGAAAGGTGGTCCAAGAGAGCCATGGCATGATATTCACTGCAAGTTAGAAGGATATGTTGCTTGGGATGTTTTGTCAAATTTTCAACAAAGGTGGGAGAAGCAGGTTGGGAATCAGCATCTATTCCCTTCGAGCATGCTTAATGAATACTTTGTCCCTCGAACCACTGCGGCAACGACCAATGATAATGAAACATGGAATGTTCAGTTGTTCAGATCCATTGATGGTGGTGCAGCTTCTGGCTTCCCCCCAGACCCAGAAGAAGCAGCTGAATTAGGCCTTGTTAGTGGGAACAACAACATCATTGAAAGAAGTATTCAAGATGCGTACATAAATGCTATTCGAAGAGCACAAAACTTCATCTACATTGAAAACCAATATTTCCTAGGGAGTTCATATGCTTGGCAAGCATCTGATATAGTAGTAGAGGATATTGGTGCGTTGCATCTCATACCAAAGGAGCTGTCATTGAAGATTGTTAGCAAGATTGAAGCAGGGGAAAGATTTTCTGTGTATGTTGTCATACCAATGTGGCCAGAAGGCATACCTGAGAGTGGTTCAGTTCAAGCAATACTAGATTGGCAAAGGAGGACAATGGAGATGATGTATGCTGATATAGCTCAAGCCATTCAAAGAACTGGAATTGAAGCGCACCCGAGAGACTACTTGACCTTTTTCTGCCTTGGAAACCGTGAGGCTCAGAAATCTAGCGAGTACACTCCCACTGAGGCACCAGAACCCGACACTGATTACTGCAGAGCACAAAAGTCTAGGCGATTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCTGCGAACATAAACCAAAGATCGATGGATGGAGCAAGGGACAGTGAGATTGCGATGGGTGCATTCCAGCCACGGCATTTAACGTGTAATGGGCCACCCAGAGGACAGATATATGGATTTCGACGTGCACTGTGGTATGAACACCTCGGAGATGTTGATGATAGAAGCATTTTCGACGATCCTGAAAGCGAAGAATGCATGAAGCTTGTGAATAATCTTGCTGAAACCAACTGGGGTGTGTACTCTGAGCAAACTTTTGATGAGAATAGAGAATTTCACCACCTCATGCGTTATCCCGTAGAAGTAACCAAGCATGGAGCCATAACGAACCTTCCGGGGCTTCAATATTTTCCTGACACTAAGGCTCGGATTTTGGGTTCCAAATCAGATTATCTTCCTCCGATTCTCACCACTTAG 2481 0.4414 MSRLLHGTLDVTIYEVDALPTLNDCDFNLCCKGTNRSVRKRFLSQLKSCLFCQCQGQPGSTQTGLYATVDLDKARVGRTKVVNDEPSNPTWNDTFRIYCAHLISHVIFTVKQKDPIDATLIGRAYVPVEQVVKGNIVDTWVPILDEDRNPIPSDSKIHVKMQFSNVLNDINWSGGIRSPRFQGVPHTFFSQRTGCNVTLYQDAHVSHGFQPWIPLSGRNYEFRKCWEDIYSAIVEARYFIYITGWSVYTEISLIRDPMQPKRITLGELLKRKAEEGVKVLMLVWDDRTSVPDFKKDGLMATHDQETAAYFKNTKVNCVLCPRNPDVGRSIVQDLETSTMFTHHQKSVVVDTQFVGAPVGQRQKRTITSFIGGIDLCDGRYDTQEHPLFSTLDTLHKDDFHQPNFPGASIKKGGPREPWHDIHCKLEGYVAWDVLSNFQQRWEKQVGNQHLFPSSMLNEYFVPRTTAATTNDNETWNVQLFRSIDGGAASGFPPDPEEAAELGLVSGNNNIIERSIQDAYINAIRRAQNFIYIENQYFLGSSYAWQASDIVVEDIGALHLIPKELSLKIVSKIEAGERFSVYVVIPMWPEGIPESGSVQAILDWQRRTMEMMYADIAQAIQRTGIEAHPRDYLTFFCLGNREAQKSSEYTPTEAPEPDTDYCRAQKSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPRHLTCNGPPRGQIYGFRRALWYEHLGDVDDRSIFDDPESEECMKLVNNLAETNWGVYSEQTFDENREFHHLMRYPVEVTKHGAITNLPGLQYFPDTKARILGSKSDYLPPILTT 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02246 826 SUPERFAMILY Phospholipase D/nuclease 507 739 - -
Viun1g02246 826 SMART C2_3c 8 140 IPR000008 -
Viun1g02246 826 ProSiteProfiles C2 domain profile. 1 141 IPR000008 -
Viun1g02246 826 FunFam Phospholipase D delta 216 459 - -
Viun1g02246 826 SMART pld_4 338 379 IPR001736 GO:0003824
Viun1g02246 826 SMART pld_4 669 696 IPR001736 GO:0003824
Viun1g02246 826 Gene3D Endonuclease Chain A 486 710 - -
Viun1g02246 826 PANTHER PHOSPHOLIPASE D 4 815 IPR015679 -
Viun1g02246 826 Pfam Phospholipase D Active site motif 338 379 IPR001736 GO:0003824
Viun1g02246 826 Pfam Phospholipase D Active site motif 670 696 IPR001736 GO:0003824
Viun1g02246 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 669 696 IPR001736 GO:0003824
Viun1g02246 826 PIRSF PLD_plant 1 826 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Viun1g02246 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 165 IPR035892 -
Viun1g02246 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 338 379 IPR001736 GO:0003824
Viun1g02246 826 CDD C2_plant_PLD 1 163 - -
Viun1g02246 826 Gene3D C2 domain 6 171 IPR035892 -
Viun1g02246 826 Gene3D Endonuclease Chain A 215 474 - -
Viun1g02246 826 Pfam C2 domain 8 143 IPR000008 -
Viun1g02246 826 Pfam Phospholipase D C terminal 745 816 IPR024632 -
Viun1g02246 826 FunFam Phospholipase D 482 715 - -
Viun1g02246 826 SUPERFAMILY Phospholipase D/nuclease 169 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02246 Viun-Chr1 33402402 33405643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02246 4 826 Phospholipase D Gene Family (Wang group) AT1G52570 62.923 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02246 K01115 - gmx:100791688 1435.62