Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02244 ATGCCTGAGCTGCTACACGGGATTCTTAAGGTAACAATATTTGAAGTTGATAGATTGCATACTGGATGTCATTTGGATTTCTGTCAGAAGGGTACAACACACAAGGGTAAGAGATTTCTAGCCCAAGTCAAGGGTTGTCTGTTGTGCAGGCCTGAGATTGTTGGGACAAGATTGTATGCAACAGTTGATTTGGACAAGGCAAGGGTTGGACGAACGAGAATGATAGGAAACCAACCCTCAAACCCAAAGTGGAACGAGAGCTTCGAAATCTACTCTGCACATCGTATCTCAAACATCATATTCACTGTCAAAGATGGTAACCCGATCGGAGCAACTCTAATCGGAAGAGCCTATGTCCCTGTGGAGCAAGTTCGCAAGGGCCCCATAATTAAGAGGTGGGTTGAGATATTAGACGAAGAAGATCATCGTCCCGTGCCGGGTCACTCCAAAATCCGCGTCAGCGTGCAATTCACCAGCGTCACTCAGGACCCAACATGTTCATGGTCTCAGGGAATTCGCATGCCGTTTTCTGGAGTTCCCCGTACATTCTTCAATCAGAGAGAAGGTTGTCATGTTACCTTGTACCAGGATGCTCATGCCCCACGTGGCGTTGGTGTTGTCCCGTACATTCCAATATCCGAAGGAAAAGACTACTTGCCCGCAAGATGTTGGGAGGACATTTACACTGCCATTATGGATGCTAAGCATTTTGTTTACATAACTGGTTGGTCCGTTTACACTGAAATAGCATTGGTTAGGGACAAGGAAGAATCAAATATCACCCTCGGGGAGTTACTGAAGAAAAAGGCCGATGAAGGTGTTAGAGTTCTTCTGCTTATTTGGAATGACAGAACTTCTGTACCAGAATTGACCAAAGATGGCTTGATGGGAACTCATGATAAGGAAACTGCTGCTTACTTTAGAAACACAAAGGTGCATTGTGTTCTGTGTCCACGGAACCCGGATGATGGGAAAAGCATGATTCAAGAACTTCAAATATCAACTATGTTCACTCATCACCAAAAGAGTGTGGTCGTTGATGCAGGTTTTGTAGGGCCATCACAGAAGAGAAGAAGTGTGGTGAGTTTCATAGGTGGTCTTGATCTCTGTGACGGGAGGTATGACACCAGGGACCATCCTCTATTTTCAACTTTGAATACGGTGCATAGAAACGATTTCCATCAACCAAACTTTCCAAATGCTTCCATTGATAAAGGTGGTCCAAGAGAGCCATGGCACGACATTCATTGCAAGCTAGAAGGTCCTATTGCTTGGGATGTTCTGTACAACTTTGAGCAAAGGTGGGAGAAGCAAGTTGGGAAGGAACATCTATTCTCGCTTGATGATCTTGATGGCATTCTAGTCCACCCATCTGATTCACAAAAATCAGAAGTGGGAGTAGAAGACACATGGAATGTTCAGCTGTTTAGATCCATTGATGGTGGTGCTGCTTTGGGGTTTCCCCAAGCCCCGGAAGAAGTTGCTGAATTAGGCCTTGTTAGTGGGAAAGACAACATGATTGAGAGAAGTATTCAGGATGCGTACATTAATGCTATCAGGCGTGCAAAAAACTTCGTCTACATTGAGAACCAGTACTTCCTAGGGAGTTCATATGCTTGGCACCCAACTAATGAGTTTGTGATTGAGAACGTTGGTGCTCTGCATCTTATACCAAAGGAGTTGACATTGAAGATTGTGAGCAAGATTGAAGCAAAAGAGAGGTTTTCTGTGTACATAGTGATCCCAATGTGGCCTGAAGGTGTACCTGAAAGCGAGTCGGTTCAAGCAATATTAGATTGGCAGAGACGAACCATGGAGATGATGTATTCCGAAATTGCTGAAGCCTTGGTAAAATTCGGCATTCAAGCACACCCTCGAGATTATTTGACATTTTTTTGCCTTGGCAATAGGGAGCATAAGGAACCGGGAGAGTATACTCCTCCACAGGAACCAGAGCCTGAGAGTGACTACAGAAGAGCACAAAATTCAAGGAGGTTCATGATCTATGTTCATTCCAAAATGATGATAGTTGATGACGAATACATAATCGTTGGGTCTGCTAACATAAATCAAAGATCAATGGAGGGTTCAAGAGACAGTGAGATTGCAATGGGTGCATTCCAACCACGTCATCTAGCATGGAATGGAAGACCAAGAGGGGAGATATATAGATTCCGACGTGCACTGTGGTATGAGCACCTTGGGGACCATGGTTTTGACTCAAAAATCTTCGACAACCCAGAACATTTGGATTGCATAGGTCTTGTGAATAGGCTTGCAGAGGAGAACTGGGACATGTACTCTAAGGAAACATTTGATGAACCTACAAAATTCCACCACCTCATGCGCTACCCTATACATGTCGCCCACGATGGAACCATAACATCTCTTCGTTTTGAACATTTTCCTGACACCAAAGCTCGGATTTTGGGTTCCTATTCATATTTCCTTCCTTCGATTCTCACTACCTAA 2472 0.4426 MPELLHGILKVTIFEVDRLHTGCHLDFCQKGTTHKGKRFLAQVKGCLLCRPEIVGTRLYATVDLDKARVGRTRMIGNQPSNPKWNESFEIYSAHRISNIIFTVKDGNPIGATLIGRAYVPVEQVRKGPIIKRWVEILDEEDHRPVPGHSKIRVSVQFTSVTQDPTCSWSQGIRMPFSGVPRTFFNQREGCHVTLYQDAHAPRGVGVVPYIPISEGKDYLPARCWEDIYTAIMDAKHFVYITGWSVYTEIALVRDKEESNITLGELLKKKADEGVRVLLLIWNDRTSVPELTKDGLMGTHDKETAAYFRNTKVHCVLCPRNPDDGKSMIQELQISTMFTHHQKSVVVDAGFVGPSQKRRSVVSFIGGLDLCDGRYDTRDHPLFSTLNTVHRNDFHQPNFPNASIDKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKEHLFSLDDLDGILVHPSDSQKSEVGVEDTWNVQLFRSIDGGAALGFPQAPEEVAELGLVSGKDNMIERSIQDAYINAIRRAKNFVYIENQYFLGSSYAWHPTNEFVIENVGALHLIPKELTLKIVSKIEAKERFSVYIVIPMWPEGVPESESVQAILDWQRRTMEMMYSEIAEALVKFGIQAHPRDYLTFFCLGNREHKEPGEYTPPQEPEPESDYRRAQNSRRFMIYVHSKMMIVDDEYIIVGSANINQRSMEGSRDSEIAMGAFQPRHLAWNGRPRGEIYRFRRALWYEHLGDHGFDSKIFDNPEHLDCIGLVNRLAEENWDMYSKETFDEPTKFHHLMRYPIHVAHDGTITSLRFEHFPDTKARILGSYSYFLPSILTT 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02244 823 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 666 693 IPR001736 GO:0003824
Viun1g02244 823 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 335 373 IPR001736 GO:0003824
Viun1g02244 823 Gene3D C2 domain 6 167 IPR035892 -
Viun1g02244 823 PIRSF PLD_plant 1 823 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Viun1g02244 823 Gene3D Endonuclease Chain A 214 452 - -
Viun1g02244 823 FunFam Phospholipase D delta 214 452 - -
Viun1g02244 823 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Viun1g02244 823 FunFam Phospholipase D 478 712 - -
Viun1g02244 823 SUPERFAMILY Phospholipase D/nuclease 175 441 - -
Viun1g02244 823 SMART pld_4 666 693 IPR001736 GO:0003824
Viun1g02244 823 SMART pld_4 335 373 IPR001736 GO:0003824
Viun1g02244 823 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 159 IPR035892 -
Viun1g02244 823 Pfam Phospholipase D C terminal 742 812 IPR024632 -
Viun1g02244 823 SUPERFAMILY Phospholipase D/nuclease 509 735 - -
Viun1g02244 823 CDD C2_plant_PLD 4 158 - -
Viun1g02244 823 Pfam Phospholipase D Active site motif 667 693 IPR001736 GO:0003824
Viun1g02244 823 Pfam Phospholipase D Active site motif 335 373 IPR001736 GO:0003824
Viun1g02244 823 SMART C2_3c 8 133 IPR000008 -
Viun1g02244 823 Gene3D Endonuclease Chain A 489 708 - -
Viun1g02244 823 PANTHER PHOSPHOLIPASE D 4 812 IPR015679 -
Viun1g02244 823 Pfam C2 domain 9 135 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02244 Viun-Chr1 33397119 33400870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02244 4 823 Phospholipase D Gene Family (Wang group) AT3G15730 62.545 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02244 K01115 - gmx:100794115 1412.9