Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02226 ATGCCGTTGAACATAACATCCATCAAAACATCCTCTAATGGAGTGTGGCAAGGTGATAATCCTCTGGACTATGCCTTCCCACTCCTAATAGTTCAAATCACCTTAGTCCTCATCGTCACTCGCTCCCTCGCTTTACTTCTCAAACCTCTCCGACAACCCAAAGTCATAGCTGAGATTCTGGGTGGTGTTTTGCTGGGCCCATCGGTACTGGGAAGAAGCAAAAGTTATCTGCATCGTATATTCCCTTCATGGAGCACGCCAACGCTGGAATCTGTGGCAAGCATAGGTCTTCTTTATTTCCTATTCCTCGTAGGTTTGGAGCTCGATCTCCATTCCATTCGCCGGAGCGGCAAAAGAGCCTTCAGCATCGCCGCCGTGGGGATCTCTCTGCCTTTCGTCTGCGGCATCGGCGTCGCCGTCATCCTCCGGAAAACAGTTGAAGGCGCAGACGAACCCGGCTTCGCGCAGTTCCTCGTCTTCATGGGCGTGGCGCTTTCCATCACCGCATTCCCGGTGCTGGCCCGCATCCTGGCGGAGCTGAAGCTGCTCACCACGAGAGTGGGGGAGACCGCGATGGCGGCGGCGGCGTTCAATGACGTAGTCGCGTGGATTCTGCTCGCGTTGGCAGTGGCTTTGGCGGGGAACGGAAGTGGTTCCCACAAGAGTCCTCTGATATCGGTGTGGGTTCTTCTTTCGGGGCTGGCGTTCGTGGTTTTGATGATGGTGGCTGTCCGACCGGCGATGGAGGTTGTGGCCAGAAGGGGCGAGAACGACGCCGGTGACGAGGTTTATGTTTGTTTGACGCTGGCGGGGGTGTTGGTGTCGGGGTTTATGACGGACCTGATCGGGATTCACTCCATATTCGGGGCCTTCGTGTTCGGGCTAACGATTCCGAAGGAGGGAAACTTCGCGAAGAAGCTGACAGAGAGAATCGAGGATTTTGTTTTAGGTTTGTTGCTCCCACTCTACTTTGCTTCCAGCGGGTTGAAAACCGACGTAACTACCATACGTGGCGCTTCCGCATGGGGTCTTCTGGTTCTGGTCATAGCCACGGCTTGTGCTGGGAAGATTCTCGGTACCTTCGCGGTGGCCATGTTCTGCATGATCCCCGCCAGAGAATCGCTCACACTTGGCGTCCTCATGAACACCAAAGGCCTCGTTGAACTCATCGTACTCAACATTGGAAAGGAAAAAAAGGTTTTAAACGATGAAATGTTCGCAATCTTAGTGCTTATGGCTCTATTCACAACCTTCATCACAACACCAATAGTTATGGCAATCTATAAACCAGCACGAGGAAACTCAACGAAAACACGGCGGAAGCTGGGTGACAGTTCTTGGGGATCGGGGAAGGAAATGGTTGAGAAGTTCAGAGTCTTGGCCTGTCTCCATGGGCCAAGCAATATCCCTTCTATCATAAATTTAATTGAATCAACTCGAAGCACAAAAAAGTCCTTGATAAAGTTGTTCATGATGCACCTTGTTGAGCTCACAGAGCGTTCATCCTCTATCATCATGGTTCATCGTGCTCGCAGGAATGGTTTCCCTTTCTTCAGCCGCTCCAATCGTGACCAGTGGCACGACCGAATTGCAGGAGCCTTTCAAGCCTACAGTCAACTGGGCCGAGTCATGGTTCGCTCCACAACCACCGTCTCTTCTCTCTCCACCATGCACGAGGACATCTGCCACGTGGCGGAGGAGAAAATGGTGACCATGATTATTTTGCCCTTCCACAAACAGTGGAGAACAGAAGTGAATGAGGAGAACGAGAAATATCAAGTGGAAGAAAATGCAGGCCACGAATGGAGAGTGGTGAACCAGAAGGTACTTAAGAATGCACCTTGCTCAGTTGTGGTGGTTGTGGATCGTGGATATGGAAATTTGCCTCAGACTCAAACTCAAACTCCAACCCCAGATTCAATTGTTTCGCAACGAGTGTGCATAATCTTCTTCGGTGGCCCAGACGATCGTGAGGCTCTAGAGTTGGGGAATAAGATGCTTGAACACCCAACAGTTAAAGTAAGTGTTGTAAGGTTTATGGAAAAAGGTGTGTTGGATGATAATAACATTGTGTTAAGCTTCTCACCTGACAAAAACAATGACGATAGTTACAGCTTCTCCACTGCCAAAATGAATCGCCAGAAAGAAAAGGAGTTGGATGAGGAGGCAATTAAGAAGTTTCAAAGCAAGTTGAATGACATGGTGGAATACATTGAGAAGTTTAGTGAGGACGTTGTGGAAGACGTGCTGGTAATAGGGAAAAGTGGGGATTACGATCTCATAATTGTTGGAAAAGGTCGATTTCCATCGAACATGGTGGCTGGGTTGGCGGAAAGAAAACCAGAACATGCTGAGTTAGGTCCTATTGGGGATGTTTTATCTTCATCGGAACATGAAGTGTTGTCATCTATATTGGTTATTCAACAACATGATGTGACACTGGTAGATGATGCTCCAATATGCAAGGTTCATGATGAGTATGGCATGGTCAACCGTGGTGAATCTTCTCATGGAGTAGGAATTTCAATTGGCAATGACAATGCAGTGTAA 2550 0.491 MPLNITSIKTSSNGVWQGDNPLDYAFPLLIVQITLVLIVTRSLALLLKPLRQPKVIAEILGGVLLGPSVLGRSKSYLHRIFPSWSTPTLESVASIGLLYFLFLVGLELDLHSIRRSGKRAFSIAAVGISLPFVCGIGVAVILRKTVEGADEPGFAQFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVVAWILLALAVALAGNGSGSHKSPLISVWVLLSGLAFVVLMMVAVRPAMEVVARRGENDAGDEVYVCLTLAGVLVSGFMTDLIGIHSIFGAFVFGLTIPKEGNFAKKLTERIEDFVLGLLLPLYFASSGLKTDVTTIRGASAWGLLVLVIATACAGKILGTFAVAMFCMIPARESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPIVMAIYKPARGNSTKTRRKLGDSSWGSGKEMVEKFRVLACLHGPSNIPSIINLIESTRSTKKSLIKLFMMHLVELTERSSSIIMVHRARRNGFPFFSRSNRDQWHDRIAGAFQAYSQLGRVMVRSTTTVSSLSTMHEDICHVAEEKMVTMIILPFHKQWRTEVNEENEKYQVEENAGHEWRVVNQKVLKNAPCSVVVVVDRGYGNLPQTQTQTPTPDSIVSQRVCIIFFGGPDDREALELGNKMLEHPTVKVSVVRFMEKGVLDDNNIVLSFSPDKNNDDSYSFSTAKMNRQKEKELDEEAIKKFQSKLNDMVEYIEKFSEDVVEDVLVIGKSGDYDLIIVGKGRFPSNMVAGLAERKPEHAELGPIGDVLSSSEHEVLSSILVIQQHDVTLVDDAPICKVHDEYGMVNRGESSHGVGISIGNDNAV 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02226 849 Gene3D - 28 436 IPR038770 -
Viun1g02226 849 Pfam Sodium/hydrogen exchanger family 36 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun1g02226 849 PANTHER CATION/H + ANTIPORTER 8 811 - -
Viun1g02226 849 FunFam Cation/H(+) antiporter 15 28 434 - -
Viun1g02226 849 Coils Coil 578 598 - -
Viun1g02226 849 Gene3D - 488 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02226 Viun-Chr1 33326028 33330431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02226 75 836 Antiporter Super Family AT3G53720 64.000 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02226 K26731 - gmx:100798644 1261.9