Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02151 ATGGAAGCACGTCCTACTTTCTCTATTGAAAGATCAAATGCTAAGCAACACAATAACTTGGGGATGTCTGAAGCATTTCCTTCATCGATGCCTGTCCTTCCAATGACTCTAGAAGGGACATGCCCCAAATTATCTGATTCTCAGCCAGCATTTATGGAAAAAGAGCTTAAAGCAAAACCTTTTACTCGTTCAAATCATTTAACTACCAGCGGAGCTGTTGGGCATATGTTTTCATCTTCTCCTGGATATTCAACTGATCTTCATCACTCATCCTTTTCATCTCATGAAAAGCACCCTATAAATACTCCTTTTATTTCACAGTCATTGAATAACATGGCTTCACTGCCATTATCTTATTCTTCAAATAGTGAGCCATTACCTTCTACAACATCAACACCTTATTCCAATGGAAACAGTGTTTCCTGGCATACAGATTCCCTGTCTAGCTTTCTTGATTTCCCTCCCAATACCTCAATTGATAATAGTCAAGTAGAAAGCAGTGCCGGCAATATTATGGCAAATGAAGAGTATTCTAAGCGAAGTGATTGGCAGGAGTGGGCTGACCAGTTAATCGGTGATGATGATCCGTTGACTTCTAATTGGAATGATCTTCTTGCTGACAACATTCAAGATCTTGAACCGAAGGCATTGTACCAGGCCTCAAATTCATCTTCACAACTTCCAATAGGACACCAATCCCAAAGCCATCAACAACTTAGTGTTTCATCTGGAGAAAATCGTGTTGGTGTTGCCCCATCTTCGTCAGCAAATTCGGTACCTTCCAAGCCACGAATGCGCTGGACACCTGAGCTTCATGAGGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAAGGTGTGCTGAAGCTTATGAAAGTTGAAGGACTAACTATATACCATGTTAAAAGCCACTTACAGAAGTACAGGACAGCTAGATATAGGCCCGAGTCATCTGAAGGAGCTGCAGAGAAAAAACTAAGTCCAATTGAAGAGATATCATCTCTAGATTTGAAAACTGGTATTGAGATCACTGAAGCTCTGCGACTGCAGATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAGCAAGGAAGGTACCTTCAGATGATGTTTGAGAAACAGTGCAAATCTGGCATTGAAACATTTAAGGCATCACCGACTGCCGTTGAGAGTCCATCTGGAGTTTCTTCTGATGCCATGAAAGATTCTACAGCCAAAACTGATTCCGAAACTGTCAAAGTGGACCTTTGCGAGTCAGGACCTAATCAAGCCAATGGCAGTACCAAAGTTGAGGAAAGCTCATCGAAAGTGGATGAGAAGCAGGATCCTCATGAAAGTAAAGCTTCTGAGAATCCTAAGCAACATGCTAGTGAAGATAGTTCTCAAGCCCCAAAGCGTCAAAGGACTGAGGATTAA 1467 0.4219 MEARPTFSIERSNAKQHNNLGMSEAFPSSMPVLPMTLEGTCPKLSDSQPAFMEKELKAKPFTRSNHLTTSGAVGHMFSSSPGYSTDLHHSSFSSHEKHPINTPFISQSLNNMASLPLSYSSNSEPLPSTTSTPYSNGNSVSWHTDSLSSFLDFPPNTSIDNSQVESSAGNIMANEEYSKRSDWQEWADQLIGDDDPLTSNWNDLLADNIQDLEPKALYQASNSSSQLPIGHQSQSHQQLSVSSGENRVGVAPSSSANSVPSKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAAEKKLSPIEEISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGIETFKASPTAVESPSGVSSDAMKDSTAKTDSETVKVDLCESGPNQANGSTKVEESSSKVDEKQDPHESKASENPKQHASEDSSQAPKRQRTED 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02151 488 MobiDBLite consensus disorder prediction 433 448 - -
Viun1g02151 488 MobiDBLite consensus disorder prediction 9 23 - -
Viun1g02151 488 MobiDBLite consensus disorder prediction 403 488 - -
Viun1g02151 488 MobiDBLite consensus disorder prediction 403 419 - -
Viun1g02151 488 MobiDBLite consensus disorder prediction 221 264 - -
Viun1g02151 488 Pfam Myb-like DNA-binding domain 264 315 IPR001005 -
Viun1g02151 488 MobiDBLite consensus disorder prediction 449 488 - -
Viun1g02151 488 Coils Coil 350 370 - -
Viun1g02151 488 Gene3D - 261 320 - -
Viun1g02151 488 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 260 319 IPR017930 -
Viun1g02151 488 MobiDBLite consensus disorder prediction 221 262 - -
Viun1g02151 488 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 232 478 IPR044848 GO:0003700
Viun1g02151 488 SUPERFAMILY Homeodomain-like 260 316 IPR009057 -
Viun1g02151 488 NCBIfam myb-like DNA-binding domain, SHAQKYF class 262 316 IPR006447 GO:0003677
Viun1g02151 488 MobiDBLite consensus disorder prediction 1 23 - -
Viun1g02151 488 Pfam MYB-CC type transfactor, LHEQLE motif 347 394 IPR025756 -
Viun1g02151 488 FunFam Myb family transcription factor 261 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02151 Viun-Chr1 32768993 32776056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02151 1 436 G2-like Transcription Factor Family AT4G28610 48.673 2.10e-107 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun1g02151 Myb_DNA-binding 9.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02151 - - gmx:100810560 795.038