Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02149 ATGCTAGACATGACAAATTTTCAAAAGGTTCACACTCTACTCCTTCCTATTCTCTTCCTATGTTTGCTTCCATTGAAAATCGCTTCATCAGCAACAGCAGAAGCAGAAGCACTTGTCAAATGGAAAAACACTCTATCCCCTCCTCTTCCTCCTTCTCTAAACTCATGGTCTCTCACCAACCTTTCCAACCTCTGCATTTGGGATGCCATTGTTTGTGACAATACCAACACAACAGTCTCACAGATAAACTTGTCTGCTGCCAATATCACTGGGACTCTCTCTGCTTTGGATTTTGCTTCCCTCCCTAACCTCACCCAACTCAACCTCAATACCAACAAGTTTGAGGGGTCAATACCATCAGCAATTGGTAACCTCTCCAAGCTCACACTGTTGGACTTGGGGAACAACTTATTTGAAGACACACTGCCTAATGAGCTAGGCCAGCTAAGGGAGCTTCAATACCTCAGCCTTTACAACAACAATCTCAATGGCACCATTCCTTATCAGCTCATGAATCTCCCTAAGGTATGGTACATGGACCTTGGATCTAATTACTTTATAACTCCTCCTCACTGGTCCCAATATTCATGCATGCCTTCCTTGACACGCCTTGCTTTACATCTAAATCCATCACTCACTGGTCAATTCCCAAGTTTCATACTGGACTGCCATAACCTCACATACCTTGACATCTCTCAGAATGGATGGCATGGCAGTATACCAGAATCCTTGTATAGCAATTTGGGCAAGCTAGAATACCTCAACCTCACCAACAGTGGGTTTGAAGGAAAACTGTCACCCAACTTGTCCATGCTTTCTAATCTCAAAGAACTTCGTATCGGTAATAACATGTTTAATGGTCCTGTTCCCACTGAGATAGGATTATTATCTGGGCTTCAATTTCTTGAACTGAATAACATTTCTGCCTATGGGAAGATTCCTTCTTCCTTAGGCCAACTTAGGGAGCTCTGGCATCTTGATCTCAGTTTAAATTCTTTTAACTCTACAATCACTTCTGAGCTTGGCCAGTGCACAAATTTATCCTTCATGAGTTTAGCAGAGAATGATTTGACTGGTCCTTTGCCTACGTCATTGGCTAATCTGACTAAAATATCAGAACTGGGATTATCAGATAATTCCTTTTCTGGTGAACTTTCTGCTACGCTCCTCTCTAATTGGACCCAGCTTACCTCCTTGCAAGTCCAAAACAATCATTTTACTGGAAATATTCCTTCAGAGATTGGCTTGTTGAAAAGAATTAAGTACCTCTATCTGTACAATAATCACTTCTCTGGTCTCATTCCTGTTGAGATTGGAAACCTGATGGAAATGACAGAGTTAGACCTTTCACAAAACCAACTCTCTGGCCCCATTCCATCAACTCTTTGGAATATGACAAGCATTCGAGTCATGAATCTTTTCTTCAATGAGCTCTCTGGAATCATTCCCCCGGATATTGGAAACTTGACCTCTCTTGAAATCTTTGATGTCAACAGCAATAACTTGTATGGGGAATTGCCAGAAACCATTGTTCAACTAACTCCATTAAGAAAATTTTCTGTGTTCAGCAATAACTTCACAGGCATAATTCCTAGAGAATTTGGAAAGGGAAACCCTTCTTTGACTAATGTCTACCTTTCAAACAACAGCTTTTCCGGAGAACTGCCACTCGACTTGTGCAGTGGTGGGCAGCTAACTATTTTGGCTGTCAATAACAACAGCTTTTCAGGGCCATTGCCAAAGTCCTTGAGAAATTGTTCATCACTTGTTAGACTTCGGCTTGATAATAATCAGCTCACCGGAAACATCACAGACGCATTTGGGGTTCTCCCAAATCTTGATTTGATCTCACTTAGTACAAACCAACTGGTTGGTGAGCTTTCCCCGGAATGGGGCGAGTGTGCCAGTTTAACCAGTATGGATATGGGAAACAACAAACTTTCTGGAAAAATTCCTTCTGCGCTCAGTAAGCTGAGCCAACTAGGGTATCTAAACCTTCATTCCAATGAATTCACTGGTAGTATCCCACCTGAAATCGGGAATCTAAGCCGGCTTTTCAGATTCAATTTGAGCAGTAACCATTTATCCGGAGAAATCCCAAAGAGTTATGGTAGATTGGCTAAGCTAGATTTTCTTGATTTATCAAATAACAACTTCAGTGGAAGCATTCCTAAAGAGCTTGGTGATTGTGATGGATTACTGAGCCTGAATTTAAGCCATAACAGTCTATCTGGGGAAATACCAAATGAACTTGGCAATCTGTTCTCACTGCAAATCATGTTGGACATCAGCAGCAACTCTCTTTCCGGGGCTCTTCCCCAGAACCTTGAAAAGTTAACAGCATTGGAGATTCTCAATGTGTCACGCAACCATCTTTCAGGGACAATCCCACGATCATATTCAAGCATGATCAGCCTTCAATCTATTGACTTTTCTTATAACAAACTGAGTGGTTCAATCCCCACAGGCCGTGTTTTCCAGACAGCTACTGCCGAAGCCTATGCTGGGAACTCAGGTTTGTGTGGTGAGATAAATGGATTAACTTGCACCAAATCACTTTCCCCGGACAAATCTGGAGGAGTTAACAAAAAGGTTCTTCTTGGGGTTATCATACCAGTTTGTGTATTAATTGGAATAATTATTGTTGGAGTAATACTTCGCCGGCGGCATAGCATAAAACACCTTGATGAAGAGTCCAAAAGCAATGAAAAAAGTGATCAGCCTATCAGCGTGGTGTGGGGAAGAGATGGAAAATTCACATTTTCTGATCTTGTTAAGGCCACCAATGACTTCAATGACAAGTACTGCATTGGAAAAGGAGGATTCGGAAGTGTTTATAGAGCACAATTGCTCACAGGTCAAGTCGTTGCTGTCAAGAGGCTCAACATATCAGACTCTGATGACATTCCACCGATGAACCGCCAGAGCTTTTTGAATGAAATAGAAGCACTTACAGGAGTGAGGCACCGCAATATAATAAAGCTTTATGGGTTCTGTTCATGCAGGGAACAAATGTTCTTGGTTTATGAATATATAGACAGAGGAAGTTTGGCAAAGGTGTTGTATGGAGAGGAAGGAAAATTGGAGCTAAGGTGGGCCAAAAGGCTAAAGATTGTGCAAGGATTAGCACATGCAATTTCATACCTGCACACAGATTGCTCCCCACCAATCGTGCACCGGGATGTAACACTGAATAACATACTATTAGACTCCGACTTAGAACCTCATCTTGCAGATTTTGGCACAGCAAAGCTACTAAGCTCAGACACTTCAACTTGGACCTCAGTTGCTGGATCCTATGGTTACATGGCTCCAGAGTTTTATTCAGTACATGTATATATAGTGTGA 3348 0.4188 MLDMTNFQKVHTLLLPILFLCLLPLKIASSATAEAEALVKWKNTLSPPLPPSLNSWSLTNLSNLCIWDAIVCDNTNTTVSQINLSAANITGTLSALDFASLPNLTQLNLNTNKFEGSIPSAIGNLSKLTLLDLGNNLFEDTLPNELGQLRELQYLSLYNNNLNGTIPYQLMNLPKVWYMDLGSNYFITPPHWSQYSCMPSLTRLALHLNPSLTGQFPSFILDCHNLTYLDISQNGWHGSIPESLYSNLGKLEYLNLTNSGFEGKLSPNLSMLSNLKELRIGNNMFNGPVPTEIGLLSGLQFLELNNISAYGKIPSSLGQLRELWHLDLSLNSFNSTITSELGQCTNLSFMSLAENDLTGPLPTSLANLTKISELGLSDNSFSGELSATLLSNWTQLTSLQVQNNHFTGNIPSEIGLLKRIKYLYLYNNHFSGLIPVEIGNLMEMTELDLSQNQLSGPIPSTLWNMTSIRVMNLFFNELSGIIPPDIGNLTSLEIFDVNSNNLYGELPETIVQLTPLRKFSVFSNNFTGIIPREFGKGNPSLTNVYLSNNSFSGELPLDLCSGGQLTILAVNNNSFSGPLPKSLRNCSSLVRLRLDNNQLTGNITDAFGVLPNLDLISLSTNQLVGELSPEWGECASLTSMDMGNNKLSGKIPSALSKLSQLGYLNLHSNEFTGSIPPEIGNLSRLFRFNLSSNHLSGEIPKSYGRLAKLDFLDLSNNNFSGSIPKELGDCDGLLSLNLSHNSLSGEIPNELGNLFSLQIMLDISSNSLSGALPQNLEKLTALEILNVSRNHLSGTIPRSYSSMISLQSIDFSYNKLSGSIPTGRVFQTATAEAYAGNSGLCGEINGLTCTKSLSPDKSGGVNKKVLLGVIIPVCVLIGIIIVGVILRRRHSIKHLDEESKSNEKSDQPISVVWGRDGKFTFSDLVKATNDFNDKYCIGKGGFGSVYRAQLLTGQVVAVKRLNISDSDDIPPMNRQSFLNEIEALTGVRHRNIIKLYGFCSCREQMFLVYEYIDRGSLAKVLYGEEGKLELRWAKRLKIVQGLAHAISYLHTDCSPPIVHRDVTLNNILLDSDLEPHLADFGTAKLLSSDTSTWTSVAGSYGYMAPEFYSVHVYIV 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02149 1115 FunFam MDIS1-interacting receptor like kinase 2 31 192 - -
Viun1g02149 1115 ProSitePatterns Protein kinases ATP-binding region signature. 937 959 IPR017441 GO:0005524
Viun1g02149 1115 SUPERFAMILY L domain-like 603 842 - -
Viun1g02149 1115 SUPERFAMILY Protein kinase-like (PK-like) 907 1111 IPR011009 -
Viun1g02149 1115 Gene3D Ribonuclease Inhibitor 31 191 IPR032675 -
Viun1g02149 1115 FunFam MDIS1-interacting receptor like kinase 2 371 537 - -
Viun1g02149 1115 SUPERFAMILY RNI-like 302 662 - -
Viun1g02149 1115 ProSiteProfiles Protein kinase domain profile. 931 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02149 1115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 538 853 - -
Viun1g02149 1115 FunFam Leucine-rich repeat receptor protein kinase MSP1 894 1011 - -
Viun1g02149 1115 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Viun1g02149 1115 SMART LRR_typ_2 320 344 IPR003591 -
Viun1g02149 1115 SMART LRR_typ_2 610 634 IPR003591 -
Viun1g02149 1115 SMART LRR_typ_2 125 149 IPR003591 -
Viun1g02149 1115 SMART LRR_typ_2 658 682 IPR003591 -
Viun1g02149 1115 SMART LRR_typ_2 779 802 IPR003591 -
Viun1g02149 1115 SMART LRR_typ_2 803 828 IPR003591 -
Viun1g02149 1115 SMART LRR_typ_2 441 465 IPR003591 -
Viun1g02149 1115 SMART LRR_typ_2 101 124 IPR003591 -
Viun1g02149 1115 SMART LRR_typ_2 489 513 IPR003591 -
Viun1g02149 1115 SMART LRR_typ_2 706 730 IPR003591 -
Viun1g02149 1115 Pfam Leucine rich repeat 395 454 IPR001611 GO:0005515
Viun1g02149 1115 Pfam Protein kinase domain 933 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02149 1115 Gene3D Ribonuclease Inhibitor 192 513 IPR032675 -
Viun1g02149 1115 SUPERFAMILY L domain-like 48 383 - -
Viun1g02149 1115 FunFam Leucine Rich Repeat family protein, expressed 193 289 - -
Viun1g02149 1115 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1057 1069 IPR008266 GO:0004672|GO:0006468
Viun1g02149 1115 Gene3D Transferase(Phosphotransferase) domain 1 1012 1113 - -
Viun1g02149 1115 Gene3D Ribonuclease Inhibitor 514 851 IPR032675 -
Viun1g02149 1115 Gene3D Phosphorylase Kinase; domain 1 892 1011 - -
Viun1g02149 1115 FunFam Os07g0541700 protein 1012 1098 - -
Viun1g02149 1115 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 299 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02149 Viun-Chr1 32753137 32756981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02149 4 652 Receptor kinase-like Gene Family AT4G08850 33.130 1.69e-84 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun1g02149 Pkinase 7.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02149 - - pvu:PHAVU_001G163700g 1819.28