Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02140 ATGGGGAGTAGGGTTAAGCAGGGCAGGAGATTGCAGAAGATGATGAAGTGTCTTTGTGTGAGGGAGCCGGTGAAAGGAGAGGATGAAACGATTCCTTCCTCGGAATCTCTTGGAATCAGGGAATTTTATTCTTCAACGGCGAGTGGGCGTTCTGGCCTCGATGGAGAAATAGAGATGTTGGGGTCTGATTCTGGTAAAATAGACGAAACTGAATTGTCTTTGCGTGAGAGTGGCATCTTGGATAACGAGGAAGCCAGTGCTCTGTTAGGAAGAGATGAATATCATAAAGGGAATATAGAAGCTGCTTTACGTGTTTATGAGAAAATAAATATAGGCGCAGTGACTTCCAAGATGAAAATTTCCCTTGCCAAAAGCAGAGAACGCCCCAAAAAACATTCCTATTATTACGCTACTCCCCCAATGTCCATGTACACGGTTGGATTACTGTTGGAAGCAATTTTCCTAAAAGCGAAATGCTTACAGCTTCTAGGGAGGTTTAAAGAATCTGCCCAAACTTGTAAAGTTATTCTGGACACAGTTGAATCTTCATTCCCTGAAGGCTTGCCTCAAAACTTCGGCAATGAAGGTAAATTGCAGGAGACTTTGAGTAAGGTAGTTGAGCTACTTCCAGATTTGTGGAAACTTGCTGATTCTTCCCGTGATGTTATTTTGTCTTACCGGCGCGCACTCCTACACAAATGGAATCTTGATGCAAAAACCATAGCAAGGATTCAGAAAGAATTTGTTGTTTTTCTTCTGTATAGTGGAGGGGAAGCAATCCCCTCGAATCTTCGTTCCCATATGGACAACTCTTTTGTACCTAGAAATAACTTAGAAGAGGCTATACTCCTTCTAATGATTTTGCTAAGAAAAATTACTCTAAAAAAACTTGAGTGGGATCCATCAATTTTGGATCACCTTGCATTTGCTCTATCTGTTTCAGGGGATTTGACAGCTTTAGCCAATCAATGGGAAGAATTACTCCCTGGGACTGTCAATCGTAGAGAAAGGTACCAGGCCTTATCTCTCTGTTATTATGGAGCAGGTAAAGACTTGGTAGCATTGAATCTTCTTAGAAAATTGTTGAGTAAAGAGGACCCGACACATGTTCCCTCTTTGTTAATTGCTTCTAAGATTTGTTGTGAGAACCCTGATCTTGCAAAAGATGGGGCAAGCTTAGCTCGCAAGGTGCTTGAGAACTTGGATGGAAGATGTAATCAGTTGGAAGGTCTTTCTAGTTGTTTACTTGGTGTTTCACTTTCAACACACTCAAAATTTTGCATTTCTAATTCTGAGAGGGTTGAGAGACAATCCGAGGCACTTCATTCTCTGGAAACTGCACACAAAGTGACTGGAATGAGTAACCCCCTTGTAATATACAGTTTGAGTTTAGAATATGCAGAGCAAAGGAAGTTGGAAGCGGCACTTCATTATGCAAAGTGCTTTCTAAACTTGGAAGCTGGGTCTAGTGTTAAAGGGTGGTTATTGTTAGCCCGAATATTATCAGCTCAAAAACAGTTTTTAGATGCCGAATCTATCCTCAATGAGGCCTTGGATCAGACTGGAATATGGGATCAAGGAGAGTTACTGCGAACAAAAGCTAAACTACAAATAGCACAGGGCCAGTTAAAAACTGCCATTGAAACATATACCCACCTTCTTGCTATTCTCCTAGTTCAGAGAAAGACGTTTGGTTCAAGGAAGACGCTATATAAGGACTACATAGATCATGCTAGGAACATGGAAATAGAAATATGGCATGATCTTGCGTATGTGTACATAAGTCTGTCACGATGGCATGATGCAGAGGTACTATGTACGAAGCAAAGGGAGTTCACGAAGAGGCTTTAA 1851 0.4133 MGSRVKQGRRLQKMMKCLCVREPVKGEDETIPSSESLGIREFYSSTASGRSGLDGEIEMLGSDSGKIDETELSLRESGILDNEEASALLGRDEYHKGNIEAALRVYEKINIGAVTSKMKISLAKSRERPKKHSYYYATPPMSMYTVGLLLEAIFLKAKCLQLLGRFKESAQTCKVILDTVESSFPEGLPQNFGNEGKLQETLSKVVELLPDLWKLADSSRDVILSYRRALLHKWNLDAKTIARIQKEFVVFLLYSGGEAIPSNLRSHMDNSFVPRNNLEEAILLLMILLRKITLKKLEWDPSILDHLAFALSVSGDLTALANQWEELLPGTVNRRERYQALSLCYYGAGKDLVALNLLRKLLSKEDPTHVPSLLIASKICCENPDLAKDGASLARKVLENLDGRCNQLEGLSSCLLGVSLSTHSKFCISNSERVERQSEALHSLETAHKVTGMSNPLVIYSLSLEYAEQRKLEAALHYAKCFLNLEAGSSVKGWLLLARILSAQKQFLDAESILNEALDQTGIWDQGELLRTKAKLQIAQGQLKTAIETYTHLLAILLVQRKTFGSRKTLYKDYIDHARNMEIEIWHDLAYVYISLSRWHDAEVLCTKQREFTKRL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02140 616 PANTHER PROTEIN NPG1 15 612 IPR043376 -
Viun1g02140 616 SUPERFAMILY TPR-like 436 611 IPR011990 GO:0005515
Viun1g02140 616 Gene3D Tetratricopeptide repeat domain 269 614 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02140 Viun-Chr1 32681385 32686707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02140 15 610 Calmodulin-binding Proteins AT4G28600 54.201 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02140 K21843 - gmx:100784353 1011.91