Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02129 ATGGATTCTGCAAGGAGTTGGTTACAGAAATTTCAACCACGAGATAAATTAAGAGCCACTACTAGAAAGAAAGACGATACTCAGGGTGGAAATGAAGGTCCAAACGTGCCTCTGGATGAAGCAGCTCTTTCCAATATCACAAAGCAGAAGGTTGCAGCAGCTAAACAATACATTGAAAACCACTATAAGGAACAAATGAAGAACCTTCAGGAAAGGAAAGAACGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTATCTGAGGAAGATCAAAATAACCTACTTAAATTTTTAGAGAAAAAGGAAACTGAATATATGCGTCTTCAAAGGCACAAGATGGGTGTAGATGATTTTGAGTTATTGACCATGATTGGAAAAGGTGCATTTGGGGAGGTCAGAGTTTGTAAGGAAAAGACTACAGATCATGTATATGCAATGAAAAAGCTTAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAACATGTCAGAGCTGAGAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATAGTTAAACTTTATTGTTCTTTCCAAGATGAGGAGTACTTATATCTTATTATGGAGTATCTACCTGGTGGGGATATGATGACTCTGCTAATGAGAAAGGATACCTTGACCGAAGATGAAGCCAGATTTTATGTGGGAGAAACAGTTCTAGCCATTGAATCAATACATAAACACAATTATATACATAGGGATATTAAGCCTGATAACTTATTACTTGATAAATATGGACACTTGAGACTATCAGATTTTGGATTATGTAAACCATTAGACTGTAGTACACTTGAAGAAACAGATTTTTCTTCTGGTCAAAATGCAAATGGATGTGCTCAAAGTGATGAATCTGGACGCACACAACAAGAACAGTTGCAACACTGGCAAAAGAATAGGAGGACACTTGCTTATTCTACTGTCGGTACACCAGACTATATTGCTCCAGAAGTTCTATTAAAGAAAGGCTATGGGATGGAATGTGATTGGTGGTCACTTGGTGCTATTATGTATGAAATGTTGGTGGGATATCCACCTTTTTATTCTGACGATCCAATGTCAACATGTAGAAAGATAGTAAATTGGAAATCTCATTTAAAGTTTCCTGAAGAAGCAAGGTTAACTGTAGAGGCTAAAGATCTTATAAGTAAACTTTTATGTAATGTGAACCAGAGACTGGGCTCAAATGGTGCAGAAGAAATAAAGGCTCATCCATTTTTCAATGGTGTTGAGTGGGAAAGATTGTATCAAATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAGTTAGACACTCAAAATTTTGAAAAGTTTGATGAGTCTGACCACCAGGCTCAATCATCATCAAGAACTGGCGGTCCATGGAGGAAGATGCTTTCATCTAAAGACTTGAATTTTGTGGGATACACATACAAAAACTTTGAAATTGTCAACGATTATCAAGTTCCTGGGATGACTGAATTAAGGAAGAAAACAACTAAAGTAAAGAAGCCTTCTGTCAAGTCTCTCTTTGATAATGATTCTGATACATCTGAAGCATCTGCATCTGAGGCTCCTGAATTAGCTTCAGGCACAATTAAAAGGATTGATGATCAATTTACTCATTCAGAATAG 1638 0.3761 MDSARSWLQKFQPRDKLRATTRKKDDTQGGNEGPNVPLDEAALSNITKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCKEKTTDHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLEETDFSSGQNANGCAQSDESGRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLTVEAKDLISKLLCNVNQRLGSNGAEEIKAHPFFNGVEWERLYQMEAAFIPEVNDELDTQNFEKFDESDHQAQSSSRTGGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMTELRKKTTKVKKPSVKSLFDNDSDTSEASASEAPELASGTIKRIDDQFTHSE 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02129 545 Pfam Protein kinase domain 121 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02129 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Viun1g02129 545 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Viun1g02129 545 MobiDBLite consensus disorder prediction 276 298 - -
Viun1g02129 545 Gene3D Transferase(Phosphotransferase) domain 1 204 433 - -
Viun1g02129 545 SUPERFAMILY Protein kinase-like (PK-like) 93 460 IPR011009 -
Viun1g02129 545 SMART pkinase_C_6 416 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Viun1g02129 545 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Viun1g02129 545 FunFam Non-specific serine/threonine protein kinase 314 433 - -
Viun1g02129 545 CDD MobB_NDR_LATS-like 54 115 - -
Viun1g02129 545 ProSiteProfiles Protein kinase domain profile. 120 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02129 545 MobiDBLite consensus disorder prediction 512 526 - -
Viun1g02129 545 FunFam Non-specific serine/threonine protein kinase 204 271 - -
Viun1g02129 545 Gene3D Phosphorylase Kinase; domain 1 118 444 - -
Viun1g02129 545 Pfam Protein kinase C terminal domain 434 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Viun1g02129 545 SMART serkin_6 120 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g02129 545 MobiDBLite consensus disorder prediction 1 42 - -
Viun1g02129 545 MobiDBLite consensus disorder prediction 504 545 - -
Viun1g02129 545 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Viun1g02129 545 MobiDBLite consensus disorder prediction 9 29 - -
Viun1g02129 545 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 466 - -
Viun1g02129 545 CDD STKc_NDR_like 118 480 - -
Viun1g02129 545 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02129 Viun-Chr1 32543192 32548379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02129 1 509 AGC Kinase Gene Family AT1G03920 77.861 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Viun1g02129 Pkinase 4.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02129 K08790 - gmx:100783286 957.592