Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02123 ATGTACATTATGAAGGAATTCAAAGATACGCTTAAATATATTGCAAGTGTACGTTCCAAAGCAGAAACTTATGGAATTTGCCGAATTGTTCCTCCTACTTGCTGGAAACCACCATGCTTTCTTCAGAGAGAACACATATGGGAAAAGTCTGAATTTGTTGCTCAGATTCAGCGAATTGATGGACATCAAAAAATTATGGCCAGTGCTTGTGAAAATACAAAAAGCAAGAGAAAAAGAGATGTAAAAGTAGCTTTGGGCTCTCAGCTTTGTAAAAGAAACACTAGCACCCCAAATAACCATAATGTTGAAGAATGTGATTGTGAGTCCGAACCTGGTCCTAAATTCAGTCTCAAAACATTTAAGGAATATGCAGATGTGTTTAAGAACGAGTACTTCAATTACAATGATAAGAAGAAATCCATAGCTTCCAATGTAAAATTAGCTATTCCTCAGCAGTCGGAACCATCTGTGGAGAATATTGAGGGTGAATATGGCCGAATTGTTCAAAATCCTTCCGAAGAAATTGAGGTGCTTTGTTGTAATAAGTTGGAGGCTGGAATATTTAGCAGTGGATTTCCTAAAGTTTCCGATTCTGTGGGGGCACACTCTTACCCTGAATATTTGAAATCTGGATGGAACTTGAATAATATGCTTTCAGGTTCCCTTCTTTCGTTTGAAAGCCCTGATGTTTCATGTAACCTTGCCCCCAATGTTAGTGTGGGAATGTGCTTCTCTGCTGTCAACTGGAAAGTTGAAGAACACCACTTATACTCATTATCGTACATACATCTGGGTGAACCAAAAGTGTGGTATAGCGTCCCAGGAAGATTTGCTGTCAACTTTGAAACAATTCGGAAAAAGTATCTACCAGATTTGCATGCAGGAAAGCATCATATGCATGACACTATGGAGAGGCAATTATCATGCTCCATATTGAAGGCAGAGGGTATACCTGTATATCGTTGTGTTCAGTATCCTCGTGAATTTGTTCTCGTCTTCCCTGGGGCATATCATTCAGGATTTGATTGTGGTTTCAACTGTTCTGAAGCAGTAAGTTTTGCTCCTCTTGAGTGGCTGCTTCATGGACAGAATGTTGTAGAGCTTTATCGTGAACAGAGGAAAAAGACATTACTTTCATATGACAAGCTTTTATTAGGAGCTGCAAATGAAGCTGTCAGGGCCCAATGGGAAACTGGTCTGTGCATGAAGAGCACATCCTCCGACAGCTTGACATATAAAGGTGCCTATCAGAAAAATGAGTTCTTAACAAAAGCTTTCAACTCTCGCATTCAGAGTGAAAGTTTGAAGAGGAAATTTCTTACCAGTTCTTTAGTATCACAAAGGATGGATGAAAAATTTTATGCCACCTGTAGGAGGGAATGTAGTATTTGCCTGTGTGATTTATACTTGTCTGCTGTTGGGTGTTCATGTTCAAATGACAAGTTTGCATGTCTTGATCATGCAAAACATTTTTGTTCTTGCACTTGGAGCAACAAAATTCTCTTGTTCCGTTATGAAATCAGTGAGTTGAATGTTCTTCGTCAAGCCTTGGACGGGAAATTAAGTGCAGTCTTTAAATGGGCCAAAGAGTATCTCGGATTAACTTTGAACTCTGTGAGATCAAAACCACGCCCAGAAAATGTTTGTGGTTCAACTTTCCCTTCCCAAGACTTGCATATGAAAAAATCTATATCCCAGACAGCAGCAAATGAATCAATAGAGAAACGACGTCAATTGCAGGAAATATTGAATTCATCAAAAAGAAAACAAAATGAAGCGGTTTCACGTTTTTCCAAAAAGAAACAAAATGAAGTGGTTTCCCAGGTCCCGCAAACTTCTGGTGGCACTCATTCGAAAACGAAGACAGATTTGCTTCGGTCAAGCTGTGCAAGTGGTAAGAAAGGAATCAATTCTGTTGGCACCAAAATTGATACGGAGAAGGTTGGGAGCAAGGTAACAACTTCAAAGAAAGAAGATCCAAAAGCATCTAATGTTGCTCCGGTTACAAACTTAAGATATTTGTCTTTTCTACAAGAACATGAGTTACTTGATGTTTCATCTGATAGTATGAGTAGCTCTTCGTCATCGGATTCTGAAGCTGCATAA 2106 0.3913 MYIMKEFKDTLKYIASVRSKAETYGICRIVPPTCWKPPCFLQREHIWEKSEFVAQIQRIDGHQKIMASACENTKSKRKRDVKVALGSQLCKRNTSTPNNHNVEECDCESEPGPKFSLKTFKEYADVFKNEYFNYNDKKKSIASNVKLAIPQQSEPSVENIEGEYGRIVQNPSEEIEVLCCNKLEAGIFSSGFPKVSDSVGAHSYPEYLKSGWNLNNMLSGSLLSFESPDVSCNLAPNVSVGMCFSAVNWKVEEHHLYSLSYIHLGEPKVWYSVPGRFAVNFETIRKKYLPDLHAGKHHMHDTMERQLSCSILKAEGIPVYRCVQYPREFVLVFPGAYHSGFDCGFNCSEAVSFAPLEWLLHGQNVVELYREQRKKTLLSYDKLLLGAANEAVRAQWETGLCMKSTSSDSLTYKGAYQKNEFLTKAFNSRIQSESLKRKFLTSSLVSQRMDEKFYATCRRECSICLCDLYLSAVGCSCSNDKFACLDHAKHFCSCTWSNKILLFRYEISELNVLRQALDGKLSAVFKWAKEYLGLTLNSVRSKPRPENVCGSTFPSQDLHMKKSISQTAANESIEKRRQLQEILNSSKRKQNEAVSRFSKKKQNEVVSQVPQTSGGTHSKTKTDLLRSSCASGKKGINSVGTKIDTEKVGSKVTTSKKEDPKASNVAPVTNLRYLSFLQEHELLDVSSDSMSSSSSSDSEAA 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02123 701 Pfam C5HC2 zinc finger 461 511 IPR004198 -
Viun1g02123 701 ProSiteProfiles JmjC domain profile. 206 370 IPR003347 -
Viun1g02123 701 PANTHER LYSINE-SPECIFIC DEMETHYLASE 4 679 - -
Viun1g02123 701 Pfam JmjC domain, hydroxylase 238 353 IPR003347 -
Viun1g02123 701 Pfam jmjN domain 4 31 IPR003349 -
Viun1g02123 701 ProSiteProfiles JmjN domain profile. 1 38 IPR003349 -
Viun1g02123 701 MobiDBLite consensus disorder prediction 583 668 - -
Viun1g02123 701 Coils Coil 569 589 - -
Viun1g02123 701 SMART JmjN_1 4 37 IPR003349 -
Viun1g02123 701 MobiDBLite consensus disorder prediction 600 635 - -
Viun1g02123 701 SUPERFAMILY Clavaminate synthase-like 118 396 - -
Viun1g02123 701 SMART cupin_9 206 370 IPR003347 -
Viun1g02123 701 Gene3D Cupin 3 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02123 Viun-Chr1 32474109 32479350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02123 5 595 JUMONJI Transcription Factor Family AT1G08620 43.800 1.37e-153 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Viun1g02123 JmjC 3.6e-30 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02123 K11446 - gmx:100804864 1005.36