Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02102 ATGGCAAAGGAGCAAATTCAGGTACTAAATGCGCTTGATGTTGCAAAAACACAATGGTACCATTTCACAGCAATCGTCATCGCTGGAATGGGCTTCTTCACCGATGCATATGATCTATTCTGCGTATCCCTTGTTACAAAGTTGCTTGGCCGCATATACTACCATGTTGATGGTGCAGCAAAGCCCGGTTCGTTGCCTCCCAATGTTGCAGCTGCTGTAAATGGTGTGGCTTTCTGTGGAACACTTTCAGGTCAACTTTTCTTTGGATGGCTTGGTGATAAGATGGGAAGGAAAAGAGTCTATGGCATGACTCTGATGATGATGGTGATATGTTCCGTCGCTTCCGGACTTTCATTCGGCCATAGTGCAAAAACTGTAATGGCAACTCTCTGCTTCTTCCGGTTCTGGCTTGGGTTTGGCATTGGTGGAGACTATCCACTTTCTGCTACCATAATGTCTGAGTATTCTAACAAGAAGACTCGCGGTGCCTTCATTGCTGCAGTGTTTGCCATGCAGGGTTTTGGCATTTTGGCAGGTGGTATATTTGCAATTATAATTTCAGCTGCATTCAATAGCTGGTATCCTGCTCCAGCATATGAGATTGATCCAGTTGGGTCAACAGTTGTACAAGCAGACTACATTTGGAGGATAATTGTGATGGTGGGAGCACTCCCAGCGGCATTGACTTACTACTGGCGGATGAAGATGCCGGAAACTGCCCGTTACACTGCTCTAGTAGCCAAGAACATGAAGCAGGCAGCAGCAGATATGTCTAAGGTTCTGCAGGTCGAGATTCAAGCTGAACCACAGAGAGAAGATCCGGCAAAGCCCAAGCCATATGGCTTGTTCTCAAAAGAGTTCCTCAGTCGCCATGGACTGCATCTGCTTGGTACATCAAGCACTTGGTTCTTGCTTGATATTGCATTTTACAGTCAAAATCTTTTCCAGAAGGATATCTTCAGTGCAATTGGTTGGATACCTCCAGCCAAAACCATGAATGCTATTGAGGAGGTTTACAAAATTGCAAGGGCTCAAACACTCATTGCTCTGTGCAGTACAGTTCCTGGCTACTGGTTCACGGTGGCTTTGATTGACAAGATGGGAAGATTTGCTATCCAATTGATGGGGTTCTTCTTCATGACTGTCTTCATGTTTGCTCTTGCCATCCCCTATGACCACTGGACTCATAAGGAGAACCGGATAGGATTTGTGGTGATGTATTCATTGACCTTTTTCTTTGCAAATTTTGGGCCCAATGCCACCACATTTGTGGTGCCAGCAGAGATTTTCCCTGCTAGATTCCGAAGTACTTGTCATGGAATTTCATCAGCATCTGGAAAGCTTGGGGCTATAGTTGGTTCCTTTGGGTTCTTGTACTTGGCACAAAACAAGGACAAAAGCAAAGCTGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAATGCACTTATCGTCTTAGGTGTAGTTAACGTATTAGGCTTCTTCTTCACTTTCTTGGTTCCTGAGGCAAAGGGAAGATCGTTAGAGGAGATGTCAGGTGAGAATGAAGAGGATGTTGGAAGCGGGGAAGAGTCAGAACAATCACATTCTCACAACAACAACAACAAAACTGTTCCGTATGTTTAG 1626 0.4514 MAKEQIQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYHVDGAAKPGSLPPNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMMMVICSVASGLSFGHSAKTVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIISAAFNSWYPAPAYEIDPVGSTVVQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNMKQAAADMSKVLQVEIQAEPQREDPAKPKPYGLFSKEFLSRHGLHLLGTSSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKMGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGSFGFLYLAQNKDKSKADAGYPAGIGVKNALIVLGVVNVLGFFFTFLVPEAKGRSLEEMSGENEEDVGSGEESEQSHSHNNNNKTVPYV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02102 541 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Viun1g02102 541 SUPERFAMILY MFS general substrate transporter 12 512 IPR036259 -
Viun1g02102 541 MobiDBLite consensus disorder prediction 507 541 - -
Viun1g02102 541 Pfam Sugar (and other) transporter 25 512 IPR005828 GO:0016020|GO:0022857|GO:0055085
Viun1g02102 541 CDD MFS_PhT 25 504 - -
Viun1g02102 541 MobiDBLite consensus disorder prediction 526 541 - -
Viun1g02102 541 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 503 - -
Viun1g02102 541 FunFam Inorganic phosphate transporter 1-6 20 526 - -
Viun1g02102 541 Gene3D MFS general substrate transporter like domains 20 529 IPR036259 -
Viun1g02102 541 NCBIfam phosphate:H+ symporter 11 514 IPR004738 GO:0005315|GO:0006817|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02102 Viun-Chr1 32389406 32392644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02102 1 518 Inorganic Solute Cotransporters AT3G54700 84.008 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02102 K08176 - gmx:100819445 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02102 1 32389406 32392644 Viun1g02102 1 32389406 32392644 ECH
Viun1g02102 1 32389406 32392644 Viun7g00760 7 6395466 6396182 PCT
Viun7g01395 7 17613367 17623840 Viun1g02102 1 32389406 32392644 PCT